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updated notes for README regarding Maven
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@kcibul
kcibul committed May 16, 2014
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Expand Up @@ -14,7 +14,7 @@ How to build MuTect

PREREQUISITES

To compile MuTect you must be using Java 1.7 and Ant 1.8. In addition, In addition, it is necessary to download the Apache BCEL Library and put it in either your system classpath, or your Ant installation lib directory. After building successfully, the MuTect JAR file will be in mutect-src/gatk-protected/dist/packages/muTect-*/muTect.jar
To compile MuTect you must be using Java 1.7 and Maven 3.0+. After building successfully, the MuTect JAR file will be in mutect/target/mutect-*.jar

BUILD STEPS

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