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Update strs bw2 20241010 #1665

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Update strs bw2 20241010 #1665

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@bw2 bw2 commented Dec 10, 2024

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phildarnowsky-broad and others added 30 commits July 16, 2024 13:21
Major changes here are:

* Instead of a single `reference_region`, STRs now have a list of `reference_regions` with a single one designated the `main_reference_region`
* Allele size distributions and genotype distributions were previously represented with an attempt to represent multidimensional data with a number of nested structs, which was serviceable when there were only one or two dimensions we might want to filter on, but was getting increasingly convoluted. Since this new data expands the number of dimensions further, rather than build on the former schema and confuse things more, these distributions are now represented with a flattened list of structs each of which represents a single subset of the distribution.
@bw2 bw2 changed the base branch from main to update_strs December 10, 2024 16:20
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