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Library gen update #100

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merged 3 commits into from
Dec 4, 2024
Merged

Library gen update #100

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f34d82a
updating library generation to newer google spreatsheet
djarecka Dec 4, 2024
640c722
fixing GA name
djarecka Dec 4, 2024
f4cbe1c
adding mark.xfail for test with python generator
djarecka Dec 4, 2024
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2 changes: 1 addition & 1 deletion .github/workflows/bican_biolink_edit.yaml
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name: generating other formats
name: bican biolink edit

on:
push:
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2 changes: 1 addition & 1 deletion linkml-schema/source_library_generation/README.md
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- Metadata from [Google Sheet](https://docs.google.com/spreadsheets/d/11OcQz1Vk3ofny3Ql7wN-XlHkZwub-hojt-fO094SxiI/edit?usp=sharing)
- All the sheets will be saved as tsv files in `gsheet_output`
- Current Google Sheet version saved at: `September 30, 9:04 PM`
- Current Google Sheet version saved at: `November 22, 4:41 PM`
- The generated LinkML schema will be saved in `bkbit/models/library_generation_model.yaml`
- Additional information:
- currently using `no-inlined` due to some issues with pydantic generation
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1 change: 1 addition & 0 deletions tests/test_generators.py
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@pytest.mark.parametrize("model", MODEL_LISTS)
@pytest.mark.xfail(reason="lack of support for curie in python generator, see issue #2436")
def test_python_generators(model):
model_python = PythonGenerator(str(model)).serialize()

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