Merge pull request #139 from djarecka/ci/new_linkml

fixing testing software

.github/workflows/reusable-generate_other_formats_new.yaml

@@ -49,21 +49,25 @@ jobs:
         run: |
           cd linkml-schema
           models_list="${{ inputs.model_name }}"
+          echo " "
           echo "Model list: $models_list"
           for name in $(echo "$models_list" | tr ',' '\n'); do
             echo "Processing $name model...";
             linkml generate json-schema ${name}.yaml > ../json-schema-autogen/${name}.json;
+            echo "json-schema generated";
             # generating jsonld context and removing generation_date field to avoid constant updates
             linkml generate jsonld-context ${name}.yaml > ../jsonld-context-autogen/${name}.context.jsonld;
             sed -i "/generation_date/d" ../jsonld-context-autogen/${name}.context.jsonld;
+            echo "jsonld-context generated";
             linkml generate pydantic ${name}.yaml > ../models_py-autogen/${name}.py;
-            linkml generate owl ${name}.yaml > ../owl-autogen/${name}.owl;
+            echo "pydantic model generated";
             if [ ${name} = "library_generation" ] || [ ${name} = "genome_annotation" ]; then
               echo "Fixing erdiagrams for $name";
               python ../utils/fix_and_create_erdiagram.py;
             else
               linkml generate erdiagram ${name}.yaml > ../erdiagram-autogen/${name}.md;
             fi
+            echo "erdiagram generated";
           done
           cd ..