MAINT: Removed 'move_files' function from 'reads.py'

[VinzentRisch]

• move_files was a helper function of annotate_reads_card that moved the files that where created by the analysis, to the allele and gene sample directories
• Not using a helper function here has the benefit of making the tests easier. And for ENH: Add new action that predicts the origin of detected ARGs. #21, additional files have to be added to the CARDAnnotationDirectoryFormat and with this setup it will be easier.

[VinzentRisch]

Hi Santiago, Michal told me to assign PRs also to you to divide the work load better.
But don't fear this is a really small one, not like the last one.

[Sann5]

Hey @VinzentRisch. I ❤️ small PRs ;). I'll take a look tmo.

[Sann5]

• ✅ It looks good to me! I just made one style suggestion (deleting a blank line between a comet and its code). I also ran the tests locally and they all passed.

• 👀 TLDR; If you already tried the action out with the modification go ahead and merge!

  • In the future it would be nice if your PR message contains a demo on how to run the action that you are modifying so that the reviewer can run it or play around with it, to see that nothing breaks. I would imagine that there is no issue here since you are just moving around already existing functionality.

[VinzentRisch]

Thanks :)

And yes I will always include it in the future I just thought the changes are so small that you don't have have to try to run it.

[codecov-commenter]

Codecov Report

Attention: 4 lines in your changes are missing coverage. Please review.

Comparison is base (94069c6) 66.74% compared to head (8f4b64f) 66.70%.

❗ Current head 8f4b64f differs from pull request most recent head 65695c1. Consider uploading reports for the commit 65695c1 to get more accurate results

Files	Patch %	Lines
q2_amr/card/reads.py	0.00%	4 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main      #25      +/-   ##
==========================================
- Coverage   66.74%   66.70%   -0.04%     
==========================================
  Files          13       13              
  Lines         836      835       -1     
==========================================
- Hits          558      557       -1     
  Misses        278      278              

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