ENH: Added FeatureTable[Frequency] output to annotate-reads-card function

[VinzentRisch]

• Added FeatureTable[Frequency] output to annotate-reads-card function
• Changed the way count tables are created in annotate-reads-card and annotate-mags-card function

[misialq]

Hey @VinzentRisch, I tried it out and it ran as expected 🚀 See some small in-line comments below. Otherwise, you should also update the output descriptions in plugin_setup.py: right now they say that you are generating a presence-absence table which is no longer true.

[codecov-commenter]

Codecov Report

Attention: 9 lines in your changes are missing coverage. Please review.

Comparison is base (4c837da) 66.58% compared to head (34ae96e) 66.74%.

Files	Patch %	Lines
q2_amr/card/utils.py	14.28%	6 Missing ⚠️
q2_amr/card/reads.py	0.00%	2 Missing ⚠️
q2_amr/card/mags.py	0.00%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main      #12      +/-   ##
==========================================
+ Coverage   66.58%   66.74%   +0.15%     
==========================================
  Files          13       13              
  Lines         838      836       -2     
==========================================
  Hits          558      558              
+ Misses        280      278       -2     

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[misialq]

Good to go!