MAINT: update README (#79)

README.md

@@ -13,17 +13,15 @@ To install _q2-amr_, follow the steps described below.
 
 ```shell
 mamba create -yn q2-amr \
-  -c https://packages.qiime2.org/qiime2/2024.2/shotgun/released/  \
+  -c https://packages.qiime2.org/qiime2/2024.2/shotgun/released/ \
   -c qiime2 -c conda-forge -c bioconda -c defaults \
-  qiime2 q2cli q2templates q2-types rgi
+  qiime2 q2cli q2templates q2-types rgi tqdm
 
 conda activate q2-amr
 
 pip install --no-deps --force-reinstall \
   git+https://github.com/misialq/rgi.git@py38-fix \
   git+https://github.com/bokulich-lab/q2-amr.git
-
-pip install git+https://github.com/qiime2/qiime2.git
 ```
 
 Refresh cache and check that everything worked:
@@ -40,16 +38,14 @@ qiime info
 CONDA_SUBDIR=osx-64 mamba create -yn q2-amr \
   -c https://packages.qiime2.org/qiime2/2024.2/shotgun/released/ \
   -c qiime2 -c conda-forge -c bioconda -c defaults \
-  qiime2 q2cli q2templates q2-types rgi
+  qiime2 q2cli q2templates q2-types rgi tqdm
 
 conda activate q2-amr
 conda config --env --set subdir osx-64
 
 pip install --no-deps --force-reinstall \
   git+https://github.com/misialq/rgi.git@py38-fix \
   git+https://github.com/bokulich-lab/q2-amr.git
-
-pip install git+https://github.com/qiime2/qiime2.git
 ```
 
 Refresh cache and check that everything worked: