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ENH: add an action to filter SampleData[Contigs] #84

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misialq opened this issue May 10, 2024 · 1 comment · May be fixed by #92
Open

ENH: add an action to filter SampleData[Contigs] #84

misialq opened this issue May 10, 2024 · 1 comment · May be fixed by #92
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enhancement New feature or request

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misialq commented May 10, 2024

Is your feature request related to a problem? Please describe.
This is related to #49 and it provides a solution to remove sample which do not have any assembled contigs.

Describe the solution you'd like
We should add a filter-contigs action which would allow us to do filtering similar to the demux-filter action. We should also include an option to filter out all empty contig files.
@misialq misialq added the enhancement New feature or request label May 10, 2024
This was referenced May 10, 2024
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@misialq misialq self-assigned this May 17, 2024
@misialq misialq linked a pull request Jul 12, 2024 that will close this issue
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misialq commented Jul 12, 2024

This is related to #91.

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ENH: add 'filter-contigs' action misialq/q2-assembly
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