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Stephen Smith edited this page Mar 3, 2017
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see Installation page
Quick Run page
and the more detailed Run Options page
For information on the theory behind these methods please see
- Smith, SA, and BC O'Meara. 2012. Divergence time estimation using penalized likelihood for large phylogenies. Bioinformatics 28 (20): 2689-2690.
and
- Sanderson, MJ. 2002. Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach. Mol Biol Evol. 19 (1): 101-109.