Adding test that will fail

blab · Mar 15, 2024 · 9cf68a5 · 9cf68a5
1 parent 0b821d1
commit 9cf68a5
Showing 1 changed file with 17 additions and 0 deletions.
diff --git a/tests/pathogen-embed-output-figure.t b/tests/pathogen-embed-output-figure.t
@@ -0,0 +1,17 @@
+Run pathogen-embed with MDS on a H3N2 HA alignment.
+
+  $ pathogen-embed \
+  >   --alignment $TESTDIR/data/h3n2_ha_alignment.fasta \
+  >   --output-dataframe embed_mds.csv \
+  >   --output-figure embed_mds_fig.png \
+  >   mds \
+  >   --components 2 \
+  >   --stress embed_mds_stress.csv
+
+if [ -f embed_mds_fig.png ]; then
+  echo "PNG file created successfully."
+else
+  echo "Error: PNG file not created."
+  exit 1
+fi
+