feat: add pathfinder templates for disease-disease

biothings · Apr 3, 2024 · 6f84108 · 6f84108
1 parent c9c9e8c
commit 6f84108
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Showing 3 changed files with 56 additions and 1 deletion.
diff --git a/data/templateGroups.json b/data/templateGroups.json
@@ -91,7 +91,8 @@
                "DiseaseOrPhenotypicFeature"
               ],
     "templates": [
-
+      "pf-disease-seqvar-disease.json",
+      "pf-disease-gene-disease.json"
     ]
   },
   {

diff --git a/data/templates/Pathfinder/pf-disease-gene-disease.json b/data/templates/Pathfinder/pf-disease-gene-disease.json
@@ -0,0 +1,27 @@
+{
+    "message": {
+        "query_graph": {
+            "nodes": {
+                "creativeQuerySubject": {
+                    "categories":["biolink:DiseaseOrPhenotypicFeature"]
+                },
+                "nA": {
+                    "categories":["biolink:Gene", "biolink:Protein"]
+                },
+                "creativeQueryObject": {
+                    "categories":["biolink:DiseaseOrPhenotypicFeature"]
+               }
+            },
+            "edges": {
+                "eA": {
+                    "subject": "creativeQuerySubject",
+                    "object": "nA"
+                },
+                "eB": {
+                    "subject": "nA",
+                    "object": "creativeQueryObject"
+                }
+            }
+        }
+    }
+}
diff --git a/data/templates/Pathfinder/pf-disease-seqvar-disease.json b/data/templates/Pathfinder/pf-disease-seqvar-disease.json
@@ -0,0 +1,27 @@
+{
+    "message": {
+        "query_graph": {
+            "nodes": {
+                "creativeQuerySubject": {
+                    "categories":["biolink:DiseaseOrPhenotypicFeature"]
+                },
+                "nA": {
+                    "categories":["biolink:SequenceVariant"]
+                },
+                "creativeQueryObject": {
+                    "categories":["biolink:DiseaseOrPhenotypicFeature"]
+               }
+            },
+            "edges": {
+                "eA": {
+                    "subject": "creativeQuerySubject",
+                    "object": "nA"
+                },
+                "eB": {
+                    "subject": "nA",
+                    "object": "creativeQueryObject"
+                }
+            }
+        }
+    }
+}