chore: move jq utils string to data/

data/jq/utils.jq

@@ -0,0 +1,48 @@
+# example increment function
+def increment: . + 1;
+
+# converts value to array if not already
+def toArray: if (. | type) == "array" then . else [.] end;
+
+# deletes key if empty array
+def delifempty(k): (if k == [] then del(k) | . else . end);
+
+# sets inputted value to "empty" if empty array
+def remifempty: (if . == [] then empty else . end);
+
+# gets first element of array (if array)
+def getfirst: if (. | type) == "array" then .[0] else . end;
+
+# generates a curie from a type and id
+def generateCurie(idType; id): id | getfirst | split(":") | last | idType + ":" + .;
+
+# generates a curie from a type and id [string] (by checking queryInputs)
+def generateCurieWithInputs(idType; id; queryInputs): (id | getfirst) as $id | reduce (queryInputs | toArray | .[]) as $input (""; if ($id | ascii_upcase | contains($input | ascii_upcase)) then $input else . end) | idType + ":" + .;
+
+# getting a nested field from inputted object (seperated by ., ie. drugcentral.bioactivity)
+def get_nested_field(field):
+. as $obj | reduce (field | split(".") | .[]) as $subfield ($obj; .[$subfield]?);
+
+# checks if object meets any filter string
+def any_filter(filter_strs):
+. as $obj | reduce (filter_strs | .[]) as $filter_str (
+  false; 
+  . or (
+    ($obj | get_nested_field($filter_str | split(":") | first)) == ($filter_str | split(":") | last)
+  )
+);
+
+# checks if object meets all filter strings
+def all_filter(filter_strs):
+. as $obj | reduce (filter_strs | .[]) as $filter_str (
+  true; 
+  . and (
+    $obj | any_filter([$filter_str | split(":") | last | split(",") | .[] | ($filter_str | split(":") | first) + ":" + .])
+  )
+);
+
+# filters the list that is supplied on all conditions
+def list_filter_all(filter_strs): if (. | type) == "array" then [.[] | if . | all_filter(filter_strs) then . else empty end] else empty end;
+
+# filters the list that is supplied on any conditions
+def list_filter_any(filter_strs): if (. | type) == "array" then [.[] | if . | any_filter(filter_strs) then . else empty end] else empty end;

src/jq_utils.ts

@@ -1,70 +1,23 @@
-import { JQVariable, BTEKGOperationObject } from "./types"
+import { JQVariable, BTEKGOperationObject } from "./types";
+import Path from "path";
+import fs from "fs";
 
-const functions = `
-# example increment function
-def increment: . + 1;
-
-# converts value to array if not already
-def toArray: if (. | type) == "array" then . else [.] end;
-
-# deletes key if empty array
-def delifempty(k): (if k == [] then del(k) | . else . end);
-
-# sets inputted value to "empty" if empty array
-def remifempty: (if . == [] then empty else . end);
-
-# gets first element of array (if array)
-def getfirst: if (. | type) == "array" then .[0] else . end;
-
-# generates a curie from a type and id
-def generateCurie(idType; id): id | getfirst | split(":") | last | idType + ":" + .;
-
-# generates a curie from a type and id [string] (by checking queryInputs)
-def generateCurieWithInputs(idType; id; queryInputs): (id | getfirst) as $id | reduce (queryInputs | toArray | .[]) as $input (""; if ($id | ascii_upcase | contains($input | ascii_upcase)) then $input else . end) | idType + ":" + .;
-
-# getting a nested field from inputted object (seperated by ., ie. drugcentral.bioactivity)
-def get_nested_field(field):
-. as $obj | reduce (field | split(".") | .[]) as $subfield ($obj; .[$subfield]?);
-
-# checks if object meets any filter string
-def any_filter(filter_strs):
-. as $obj | reduce (filter_strs | .[]) as $filter_str (
-  false; 
-  . or (
-    ($obj | get_nested_field($filter_str | split(":") | first)) == ($filter_str | split(":") | last)
-  )
-);
-
-# checks if object meets all filter strings
-def all_filter(filter_strs):
-. as $obj | reduce (filter_strs | .[]) as $filter_str (
-  true; 
-  . and (
-    $obj | any_filter([$filter_str | split(":") | last | split(",") | .[] | ($filter_str | split(":") | first) + ":" + .])
-  )
-);
-
-# filters the list that is supplied on all conditions
-def list_filter_all(filter_strs): if (. | type) == "array" then [.[] | if . | all_filter(filter_strs) then . else empty end] else empty end;
-
-# filters the list that is supplied on any conditions
-def list_filter_any(filter_strs): if (. | type) == "array" then [.[] | if . | any_filter(filter_strs) then . else empty end] else empty end;
-`
+const functions = fs.readFileSync(Path.resolve(`${__dirname}/../data/jq/utils.jq`), { encoding: "utf8" });
 
 function generateVariables(variables: JQVariable[]) {
-    let variableString = '';
-    for (const variable of variables) {
-      variableString += `${variable.value} as ${variable.name} | `;
-    }
-    return variableString;
+  let variableString = "";
+  for (const variable of variables) {
+    variableString += `${variable.value} as ${variable.name} | `;
+  }
+  return variableString;
 }
 
 export function generateFilterString(filterString: string, edge: BTEKGOperationObject) {
   const variables = [
     {
-      name: '$edge',
-      value: JSON.stringify(edge)
-    }
+      name: "$edge",
+      value: JSON.stringify(edge),
+    },
   ];
-  return `${functions}\n${generateVariables(variables)}${filterString}`
-} 
+  return `${functions}\n${generateVariables(variables)}${filterString}`;
+}