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Grassland diversity datasets

This folder contains scripts related to the synthesis grassland diversity datasets


-->From the following Bexis datasets:

  • 27707: Assembled RAW diversity from grassland EPs (2008-2020) for multidiversity synthesis - November 2020
  • 27706: Assembled species information from grassland EPs (2008-2020) for multidiversity synthesis - November 2020

--> To the following Bexis datasets:

  • 31434: Assembled RAW diversity from grassland EPs (2008-2020) for multidiversity synthesis - January 2023
  • 31435: Assembled species information from grassland EPs (2008-2020) for multidiversity synthesis - January 2023

Scripts

  • 220726_UpdateGRL_BacteriaPlotsPatch.R: This script is not a full update but a fix to: #1. add two more plots for bacteria 2014 (after a mistake in script 210112_UpdateGRLdataset.R LINE:282); #2. add dung beetles 2014; and #3. remove protists 2011_2012, OTU names in the 3 regions were not comparable, add one missing plot (SEG16 in 2011)

-->From the following Bexis datasets:

  • 21766: Assembled RAW diversity from grassland EPs (2010-2016) for multidiversity synthesis
  • 21726: Assembled species information from grassland EPs (2010-2016) for multidiversity synthesis

--> To the following Bexis datasets:

  • 27707: Assembled RAW diversity from grassland EPs (2008-2020) for multidiversity synthesis - November 2020
  • 27706: Assembled species information from grassland EPs (2008-2020) for multidiversity synthesis - November 2020

Scripts

  • 200220_UpdateGRLdataset.R -- Intermediate script
  • 201111_UpdateGRLdataset.R -- Intermediate script
  • 201116_UpdateGRLdataset.R -- Intermediate script
  • 210112_UpdateGRLdataset.R -- Final script
  • 210826_UpdateGRLdataset_VersionPatch.R -- Final script (update to BExIS2 versions)

-->From the following Bexis datasets:

  • 21766: Assembled RAW diversity from grassland EPs (2010-2016) for multidiversity synthesis
  • 21726: Assembled species information from grassland EPs (2010-2016) for multidiversity synthesis

--> To the following Bexis datasets:

  • 25626 Assembled RAW diversity from grassland EPs (2010-2017) for multidiversity synthesis - July 2019
  • 25646 Assembled species information from grassland EPs (2010-2017) for multidiversity synthesis - July2019

Scripts

  • 190715_UpdateGRLdataset.R -- Intermdiate script
  • 190802_UpdateGRLdataset.R -- Final script
  • 210826_UpdateGRLdataset_VersionPatch.R -- Final script (update to BExIS2 versions)

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Scripts to build the grassland diversity dataset

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