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Update Vamb to v4.1.3 #43684

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merged 4 commits into from
Oct 16, 2023
Merged

Update Vamb to v4.1.3 #43684

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de20810
Bump Vamb to v4.1.3
jakobnissen Oct 15, 2023
faa1846
Update
jakobnissen Oct 15, 2023
315d083
Try again
jakobnissen Oct 15, 2023
edd8f09
Try to fix line 27
jakobnissen Oct 16, 2023
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22 changes: 12 additions & 10 deletions recipes/vamb/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,33 +1,35 @@
{% set version = "3.0.2" %}
{% set version = "4.1.3" %}

package:
name: vamb
version: {{ version }}

source:
url: https://github.com/RasmussenLab/vamb/archive/{{ version }}.tar.gz
sha256: fb63011a89ec7fe1052983973dda6cdcdd796938cdf80ed1013f253c7ded8c67
url: https://github.com/RasmussenLab/vamb/archive/refs/tags/v{{ version }}.tar.gz
sha256: 3b82a36138ebbebf6efe5203da4f9dfae9d0335137bac9775d5b427021aa5645

build:
number: 2
number: 0
# Skipping py>=38 since no pytorch-cpu builds for Py3.8 are available. skip: True # [py27]
skip: True # [py<30 or py>=38]
entry_points:
- vamb=vamb.__main__:main
script: {{ PYTHON }} -m pip install . --no-deps -vv
run_exports:
- {{ pin_subpackage('vamb', max_pin="x") }}

requirements:
build:
- {{ compiler('c') }}
host:
- python
- python >=3.9.0,<3.12
- pip
- cython >=0.25.2
- cython >=3.0.0
run:
- python
- numpy >=1.15
- pytorch-cpu >=0.4
- pysam >=0.14
- python >=3.9.0,<3.12
- numpy ==1.24.2
- torch ==1.13.1
- pycoverm ==0.6.0

test:
imports:
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