phasius: Update to 0.2.0 and add linux-aarch64 build (#52960)

* phasius: Update to 0.2.0 and add linux-aarch64 build Signed-off-by: Martin Tzvetanov Grigorov <[email protected]> * Reset the build number * Fix the license files * Update the download link * Add clangdev as a build dependency --------- Signed-off-by: Martin Tzvetanov Grigorov <[email protected]>
bioconda · Dec 23, 2024 · c79bc31 · c79bc31
1 parent 89aad2d
commit c79bc31
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diff --git a/recipes/phasius/build.sh b/recipes/phasius/build.sh
@@ -1,11 +1,12 @@
-#!/bin/bash -euo
+#!/bin/bash
+
+set -xeuo
+
 export CFLAGS="${CFLAGS} -fcommon"
 export CXXFLAGS="${CFLAGS} -fcommon"
 
-# Add workaround for SSH-based Git connections from Rust/cargo.  See https://github.com/rust-lang/cargo/issues/2078 for details.
-# We set CARGO_HOME because we don't pass on HOME to conda-build, thus rendering the default "${HOME}/.cargo" defunct.
-export CARGO_NET_GIT_FETCH_WITH_CLI=true CARGO_HOME="$(pwd)/.cargo"
+cargo-bundle-licenses --format yaml --output THIRDPARTY.yml
 
 # build statically linked binary with Rust
 export LD=$CC
-C_INCLUDE_PATH=$PREFIX/include LIBRARY_PATH=$PREFIX/lib RUST_BACKTRACE=1 cargo install --verbose --root $PREFIX --path .
+C_INCLUDE_PATH=$PREFIX/include LIBRARY_PATH=$PREFIX/lib RUST_BACKTRACE=1 cargo install --verbose --root $PREFIX --path . --no-track
diff --git a/recipes/phasius/meta.yaml b/recipes/phasius/meta.yaml
@@ -1,26 +1,30 @@
-{% set version = "0.1.0" %}
+{% set name = "phasius" %}
+{% set version = "0.2.0" %}
 
 package:
-  name: phasius
+  name: {{ name }}
   version: {{ version }}
 
 build:
-  number: 2
+  number: 0
   skip: true  # [osx]
-#  script: cargo install --path . --root ${PREFIX}
+  run_exports:
+    - {{ pin_subpackage(name, max_pin='x.x') }}
 
 source:
-  url: https://github.com/wdecoster/phasius/archive/v{{ version }}d.tar.gz
-  sha256: fc210f31c06f5437264cabff9be785e708a293f945b9e865c2bd964fdb61f9c7
+  url: https://github.com/wdecoster/phasius/archive/refs/tags/v{{ version }}.tar.gz
+  sha256: a5b320303383b473661fccf7ec93f3b555b21d86d78d9cdaf5317cc9bcf3cb0e
 
 requirements:
   build:
-    - rust >=1.60  
     - autoconf
     - make
+    - {{ compiler('rust') }}
     - {{ compiler('cxx') }}
     - pkg-config
     - cmake
+    - cargo-bundle-licenses
+    - clangdev
   host:
   run:
 
@@ -32,5 +36,11 @@ test:
 about:
   home: https://github.com/wdecoster/phasius
   license: MIT
-  license_file: LICENSE
+  license_file: 
+    - LICENSE
+    - THIRDPARTY.yml
   summary: A rust tool to create phase-block maps from phased cram/bam files
+
+extra:
+  additional-platforms:
+   - linux-aarch64