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Bump bioconda-repodata-patches for new libdeflate release (#52906)
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Bumping by two because we missed the 1.22 release in October.
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jmarshall authored Dec 22, 2024
1 parent b1624ac commit 713db1f
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2 changes: 1 addition & 1 deletion recipes/bioconda-repodata-patches/gen_patch_json.py
Original file line number Diff line number Diff line change
Expand Up @@ -175,7 +175,7 @@ def _gen_new_index(repodata, subdir):
if record_name in ['htslib', 'staden_io_lib', 'fastp', 'pysam'] and has_dep(record, 'libdeflate'):
# skip deps that allow anything <1.3, which contained an incompatible library filename
# TODO adjust the replacement (exclusive) upper bound each time a compatible new libdeflate is released
_pin_looser(fn, record, 'libdeflate', min_lower_bound='1.3', upper_bound='1.22')
_pin_looser(fn, record, 'libdeflate', min_lower_bound='1.3', upper_bound='1.24')

# nanosim <=3.1.0 requires scikit-learn<=0.22.1
if record_name.startswith('nanosim') and has_dep(record, "scikit-learn") and version <= "3.1.0":
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2 changes: 1 addition & 1 deletion recipes/bioconda-repodata-patches/meta.yaml
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@@ -1,6 +1,6 @@
package:
name: bioconda-repodata-patches
version: 20240913 # ensure that this is the "current" date, and always higher than the latest version in master
version: 20241219 # ensure that this is the "current" date, and always higher than the latest version in master

source:
path: .
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