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Update minimap2 container image to 2.27--he4a0461_1.
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heuermh committed Mar 20, 2024
1 parent fd032b0 commit c1ec85e
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions core/src/main/scala/org/bdgenomics/cannoli/Minimap2.scala
Original file line number Diff line number Diff line change
Expand Up @@ -36,8 +36,8 @@ class Minimap2Args extends ReadGroupArgs {
@Args4jOption(required = false, name = "-executable", usage = "Path to the Minimap2 executable. Defaults to minimap2.")
var executable: String = "minimap2"

@Args4jOption(required = false, name = "-image", usage = "Container image to use. Defaults to quay.io/biocontainers/minimap2:2.25--h7132678_0.")
var image: String = "quay.io/biocontainers/minimap2:2.25--h7132678_0"
@Args4jOption(required = false, name = "-image", usage = "Container image to use. Defaults to quay.io/biocontainers/minimap2:2.27--he4a0461_1.")
var image: String = "quay.io/biocontainers/minimap2:2.27--he4a0461_1"

@Args4jOption(required = false, name = "-sudo", usage = "Run via sudo.")
var sudo: Boolean = false
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