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Update bwa container image to 0.7.18--he4a0461_0.
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heuermh committed Apr 24, 2024
1 parent a5ed768 commit 4e7c8fb
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions core/src/main/scala/org/bdgenomics/cannoli/BwaMem.scala
Original file line number Diff line number Diff line change
Expand Up @@ -38,8 +38,8 @@ class BwaMemArgs extends ReadGroupArgs {
@Args4jOption(required = false, name = "-executable", usage = "Path to the BWA executable. Defaults to bwa.")
var executable: String = "bwa"

@Args4jOption(required = false, name = "-image", usage = "Container image to use. Defaults to quay.io/biocontainers/bwa:0.7.17--h7132678_9.")
var image: String = "quay.io/biocontainers/bwa:0.7.17--h7132678_9"
@Args4jOption(required = false, name = "-image", usage = "Container image to use. Defaults to quay.io/biocontainers/bwa:0.7.18--he4a0461_0.")
var image: String = "quay.io/biocontainers/bwa:0.7.18--he4a0461_0"

@Args4jOption(required = false, name = "-sudo", usage = "Run via sudo.")
var sudo: Boolean = false
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