Modifying changelog.

CHANGES.md

@@ -1,5 +1,41 @@
 # ADAM Changelog #
 
+### Version 0.34.0 ###
+
+**Closed issues:**
+
+ - Update Spark dependency version to 3.0.2 [\#2300](https://github.com/bigdatagenomics/adam/issues/2300)
+ - printInfoFields does not display value of Type=Flag VCF INFO fields [\#2299](https://github.com/bigdatagenomics/adam/issues/2299)
+ - Add CRAM reference argument to CLI for loading alignments and fragments  [\#2293](https://github.com/bigdatagenomics/adam/issues/2293)
+ - Duplicate version 0.33.0 release notes in changelog [\#2290](https://github.com/bigdatagenomics/adam/issues/2290)
+ - adam-submit: Not able to transform fasta file to adam format. [\#2288](https://github.com/bigdatagenomics/adam/issues/2288)
+ - Bump Scala 2.12 dependency version to 2.12.10 [\#2287](https://github.com/bigdatagenomics/adam/issues/2287)
+ - Default build to Hadoop 3.x [\#2285](https://github.com/bigdatagenomics/adam/issues/2285)
+ - Remove Scala 2.11.x from build and release matrix [\#2284](https://github.com/bigdatagenomics/adam/issues/2284)
+ - Remove Spark 2.x from build and release matrix [\#2283](https://github.com/bigdatagenomics/adam/issues/2283)
+ - All of my samples fail due to adam erroneously thinking there are different numbers of reads in r1 and r2. [\#2247](https://github.com/bigdatagenomics/adam/issues/2247)
+ - Rename sequences SequenceDictionary field to references [\#2171](https://github.com/bigdatagenomics/adam/issues/2171)
+ - Replace jvmRdd with jvmDataset in adam-python [\#2134](https://github.com/bigdatagenomics/adam/issues/2134)
+ - Refactor org.bdgenomics.adam.rdd package to org.bdgenomics.adam.ds [\#2112](https://github.com/bigdatagenomics/adam/issues/2112)
+ - FastaConverter causes mango to crash due to missing contigNames [\#2038](https://github.com/bigdatagenomics/adam/issues/2038)
+ - Verify LICENSE and NOTICE per upstream changes [\#2005](https://github.com/bigdatagenomics/adam/issues/2005)
+ - Add convenience method to filter by contig [\#1877](https://github.com/bigdatagenomics/adam/issues/1877)
+ - Confirm all I/O resources created by ADAM are closed properly [\#1719](https://github.com/bigdatagenomics/adam/issues/1719)
+ - Remove Smith-Waterman consensus mode [\#1414](https://github.com/bigdatagenomics/adam/issues/1414)
+
+**Merged and closed pull requests:**
+
+ - [ADAM-2300] Update Spark dependency version to 3.0.2 [\#2301](https://github.com/bigdatagenomics/adam/pull/2301) ([heuermh](https://github.com/heuermh))
+ - [ADAM-2171] Rename sequences SequenceDictionary field to references [\#2298](https://github.com/bigdatagenomics/adam/pull/2298) ([heuermh](https://github.com/heuermh))
+ - Bump adam-python version to 0.34.0a0 [\#2297](https://github.com/bigdatagenomics/adam/pull/2297) ([heuermh](https://github.com/heuermh))
+ - [ADAM-2112] Refactor org.bdgenomics.adam.rdd package to org.bdgenomics.adam.ds [\#2296](https://github.com/bigdatagenomics/adam/pull/2296) ([heuermh](https://github.com/heuermh))
+ - [ADAM-2293] Add CRAM reference argument to CLI for loading alignments and fragments [\#2294](https://github.com/bigdatagenomics/adam/pull/2294) ([heuermh](https://github.com/heuermh))
+ - [ADAM-1877] Add convenience method to filter to reference name [\#2292](https://github.com/bigdatagenomics/adam/pull/2292) ([heuermh](https://github.com/heuermh))
+ - [ADAM-2290] Remove duplicate version 0.33.0 release notes in changelog [\#2291](https://github.com/bigdatagenomics/adam/pull/2291) ([heuermh](https://github.com/heuermh))
+ - Update build and release matrix [\#2286](https://github.com/bigdatagenomics/adam/pull/2286) ([heuermh](https://github.com/heuermh))
+ - [ADAM-2112] Refactor org.bdgenomics.adam.rdd package to org.bdgenomics.adam.ds [\#2137](https://github.com/bigdatagenomics/adam/pull/2137) ([heuermh](https://github.com/heuermh))
+
+
 
 ### Version 0.33.0 ###