fix: Change test samplesheet

beiko-lab · Sep 5, 2023 · c7fa33b · c7fa33b
1 parent fa3228c
commit c7fa33b
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Showing 2 changed files with 5 additions and 5 deletions.
diff --git a/test/test_annotation_dataset.csv b/test/test_annotation_dataset.csv
@@ -1,5 +1,5 @@
 sample,fna_file_path
-test_1,https://github.com/beiko-lab/arete/raw/master/test/SRR14022735_T1.scaffolds.fa
-test_2,https://github.com/beiko-lab/arete/raw/master/test/SRR14022737_T1.scaffolds.fa
-test_3,https://github.com/beiko-lab/arete/raw/master/test/SRR14022754_T1.scaffolds.fa
-test_4,https://github.com/beiko-lab/arete/raw/master/test/SRR14022764_T1.scaffolds.fa
+SRR14022735_T1,test/SRR14022735_T1.scaffolds.fa
+SRR14022737_T1,test/SRR14022737_T1.scaffolds.fa
+SRR14022754_T1,test/SRR14022754_T1.scaffolds.fa
+SRR14022764_T1,test/SRR14022764_T1.scaffolds.fa
diff --git a/tests/subworkflows/local/annotation_input_check.nf.test b/tests/subworkflows/local/annotation_input_check.nf.test
@@ -20,7 +20,7 @@ nextflow_workflow {
         then {
             assert workflow.success
             assert workflow.out.genomes.size() == 4
-            assert workflow.out.genomes.get(0).get(0) == ['id':'test_1', 'single_end':true]
+            assert workflow.out.genomes.get(0).get(0) == ['id':'SRR14022735_T1', 'single_end':true]
         }
 
     }