Merge branch 'main' into DC61_repro

CODE_OF_CONDUCT.md

@@ -5,7 +5,7 @@
 We as members, contributors, and leaders pledge to make participation in our
 community a harassment-free experience for everyone, regardless of age, body
 size, visible or invisible disability, ethnicity, sex characteristics, gender
-identity and expression, level of experience, education, socio-economic status,
+identity and expression, level of experience, education, socioeconomic status,
 nationality, personal appearance, race, caste, color, religion, or sexual
 identity and orientation.
 

INSTALL.md

@@ -95,6 +95,7 @@ Finally, you are able to use the scripts of the project :
 
 * `narps_open_runner`: run pipelines
 * `narps_open_tester`: run a pipeline and test its results against original ones from the team
+* `narps_open_correlations`: compute and display correlation between results and original ones from the team
 * `narps_description`: get the textual description made by a team
 * `narps_results`: download the original results from teams
 * `narps_open_status`: get status information about the development process of the pipelines
@@ -107,6 +108,10 @@ narps_open_runner -t 2T6S -n 40
 #   and produces a report with correlation values.
 narps_open_tester -t 08MQ
 
+# Compute the correlation values between results of 2T6S reproduction on 60 subjects with original ones
+#   WARNING : 2T6S must have been previously computed with a group of 60 subjects
+narps_open_correlations -t 2T6S -n 60
+
 # Get the description of team C88N in markdown formatting
 narps_description -t C88N --md
 
@@ -121,6 +126,7 @@ narps_open_status --json
 > For further information about these command line tools, read the corresponding documentation pages.
 > * `narps_open_runner` : [docs/running.md](docs/running.md)
 > * `narps_open_tester` : [docs/testing.md](docs/testing.md#command-line-tool)
+> * `narps_open_correlations` : [docs/correlation.md](docs/correlation.md#command-line-tool)
 > * `narps_description` : [docs/description.md](docs/description.md)
 > * `narps_results` : [docs/data.md](docs/data.md#results-from-narps-teams)
 > * `narps_open_status` : [docs/status.md](docs/status.md)

narps_open/pipelines/__init__.py

@@ -23,11 +23,11 @@
     '2T7P': None,
     '3C6G': None,
     '3PQ2': None,
-    '3TR7': None,
+    '3TR7': 'PipelineTeam3TR7',
     '43FJ': None,
     '46CD': None,
-    '4SZ2': None,
-    '4TQ6': None,
+    '4SZ2': 'PipelineTeam4SZ2',
+    '4TQ6': 'PipelineTeam4TQ6',
     '50GV': None,
     '51PW': 'PipelineTeam51PW',
     '5G9K': None,
@@ -40,7 +40,7 @@
     '9T8E': None,
     '9U7M': None,
     'AO86': None,
-    'B23O': None,
+    'B23O': 'PipelineTeamB23O',
     'B5I6': None,
     'C22U': None,
     'C88N': 'PipelineTeamC88N',
@@ -55,11 +55,11 @@
     'K9P0': None,
     'L1A8': None,
     'L3V8': None,
-    'L7J7': None,
+    'L7J7': 'PipelineTeamL7J7',
     'L9G5': None,
     'O03M': None,
-    'O21U': None,
-    'O6R6': None,
+    'O21U': 'PipelineTeamO21U',
+    'O6R6': 'PipelineTeamO6R6',
     'P5F3': None,
     'Q58J': None,
     'Q6O0': 'PipelineTeamQ6O0',