Add instructions to build a docker for GraphStorm-wholegraph on AWS #475
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…nstances with efa support
isratnisa
suggested changes
Sep 26, 2023
| RUN mkdir -p ${SSHDIR} | ||
| RUN ssh-keygen -t rsa -f ${SSHDIR}/id_rsa -N '' | ||
| RUN cp ${SSHDIR}/id_rsa.pub ${SSHDIR}/authorized_keys | ||
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We need to modify /root/.ssh/config too.
RUN touch /root/.ssh/config;echo -e "Host *\n StrictHostKeyChecking no\n UserKnownHostsFile=/dev/null\n Port ${SSH_PORT}" > /root/.ssh/config
| && make && make install | ||
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| ENV PATH "/opt/amazon/efa/bin:$PATH" | ||
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We need install NCCL test (Step 8) to verify the EFA+NCCL setup.
isratnisa
reviewed
Sep 26, 2023
| RUN wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/libnccl2_2.15.1-1+cuda11.8_amd64.deb | ||
| RUN dpkg -i libnccl2_2.15.1-1+cuda11.8_amd64.deb | ||
| RUN wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/libnccl-dev_2.15.1-1+cuda11.8_amd64.deb | ||
| RUN dpkg -i libnccl-dev_2.15.1-1+cuda11.8_amd64.deb |
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We can also follow step 6 from the EC2 doc to install NCCL.
isratnisa
reviewed
Sep 26, 2023
| ENV dev_type=GPU | ||
| # Install DGL GPU version | ||
| RUN pip3 install dgl==1.0.4+cu117 -f https://data.dgl.ai/wheels/cu117/repo.html && rm -rf /root/.cache | ||
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We need to fix python installation. By default docker is using conda.
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Not sure if it has to do with python installation but I had to add:
pip install --no-cache-dir boto3 'h5py>=2.10.0' scipy tqdm 'pyarrow>=3' 'transformers==4.28.1' pandas pylint scikit-learn ogb psutil```
classicsong
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