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refactor: BO and ifBO #134

Merged
merged 64 commits into from
Oct 8, 2024
Merged

refactor: BO and ifBO #134

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add9eaa
refactor: DeepGP
eddiebergman Aug 13, 2024
3aba212
fix: Address comements from @karibbov
eddiebergman Aug 14, 2024
40b6830
fix: Import from the moved file
eddiebergman Aug 14, 2024
df4e089
refactor: Cleanup vectorial kernels
eddiebergman Aug 14, 2024
dc3ae03
refactor: Lengthscale is always tensor
eddiebergman Aug 14, 2024
3b8e549
refactor: Cleanup and reduce duplicate preprocessing GP
eddiebergman Aug 15, 2024
0f235ee
fix: typo
eddiebergman Aug 15, 2024
83331d9
fix: unscaled distance
eddiebergman Aug 15, 2024
a3a230d
fix: GP Fixed up
eddiebergman Aug 18, 2024
27b3119
checkpoint: not working yet
eddiebergman Aug 20, 2024
27bb0a3
refactor: Switch to botorch
eddiebergman Aug 26, 2024
cf43821
refactor: Prior distributions
eddiebergman Aug 27, 2024
6db710e
refactor: Add in the priors
eddiebergman Aug 27, 2024
a013a13
refactor: Clean up the BO
eddiebergman Aug 27, 2024
d4a11a2
refactor: Delete unused files
eddiebergman Aug 27, 2024
0338a99
fix: CenteredPrior prefers [0, 1] sample domain
eddiebergman Aug 27, 2024
058ab2b
refactor: Revamp Sampler and Prior
eddiebergman Aug 28, 2024
1cdc307
refactor: Weighted Sampler
eddiebergman Aug 28, 2024
dd72008
refactor: Simplify BO some more
eddiebergman Aug 28, 2024
8658d70
fix: Need at least 2 points for intial design
eddiebergman Aug 28, 2024
b135c74
fix: Ensure we do the last intial design
eddiebergman Aug 28, 2024
6fd4a29
doc: Add todo note on no reported loss
eddiebergman Aug 28, 2024
bb0eb38
fix: Add in the GP optimization
eddiebergman Aug 29, 2024
41deea6
fix: Memory efficient log_prior for CenteredPrior
eddiebergman Aug 29, 2024
205f503
feat: pibo and cost cooling
eddiebergman Aug 29, 2024
03729ca
fix: Return acquisition_functions still in use
eddiebergman Aug 29, 2024
16c27f8
fix: Some minor cleanup fixes
eddiebergman Aug 29, 2024
da4f376
optim: Switch to just additive kernel
eddiebergman Aug 29, 2024
5f76a7e
feat: Stable pibo implementation
eddiebergman Aug 30, 2024
b2d3e15
fix: Remove stray prints
eddiebergman Aug 30, 2024
f209f47
optim: Lengthscale has more wiggle-room in high d
eddiebergman Aug 30, 2024
c815163
feat: Cost cooling
eddiebergman Sep 8, 2024
da47d70
optim: Scale initial sample points for acq. opt based on ndims
eddiebergman Sep 8, 2024
55f1acb
Merge branch 'master' into refactor-acq-refresh
eddiebergman Sep 18, 2024
5a71030
fix: Remove old model
eddiebergman Sep 18, 2024
afc904d
ci: Update ruff version
eddiebergman Sep 18, 2024
f0ec81e
fix: Update pre-commit
eddiebergman Sep 18, 2024
54b6059
ci: Update deps on botorch/gpytorch
eddiebergman Sep 18, 2024
6782a8e
fix: rely on botorch's new defaults
eddiebergman Sep 18, 2024
4e8e308
merge
eddiebergman Sep 18, 2024
6303a65
reapply stash
eddiebergman Sep 18, 2024
9394350
refactor: Simpler ifbo
eddiebergman Sep 18, 2024
d1c7a85
refactor: Ifbo
eddiebergman Sep 24, 2024
e931878
fix(ifbo): bin count for budget index
eddiebergman Sep 25, 2024
becd324
optim: Use torch operation for validation
eddiebergman Sep 25, 2024
5149034
refactor: Cleanup
eddiebergman Sep 25, 2024
307fc45
fix: Remove the removed MFPI_Random
eddiebergman Sep 25, 2024
d162d1f
fix: Use budget_domain bounds where possible
eddiebergman Sep 25, 2024
7e2a048
fix: Increment lower bound of fidelity space to make divisble
eddiebergman Sep 25, 2024
995bf9c
doc(ifbo): Document how encoding works
eddiebergman Sep 25, 2024
9b1d050
fix(ifbo): Example running again
eddiebergman Sep 25, 2024
da34471
refactor: Remove PFNSurrogate
eddiebergman Sep 25, 2024
268dfb6
fix(ifbo): handle all trials which contain model-able info
eddiebergman Sep 25, 2024
673530e
refactor: Remove unused
eddiebergman Sep 25, 2024
178ae68
refactor(ifbo): Mostly clean
eddiebergman Sep 30, 2024
967e679
refactor(ifbo): Better acq function optimization
eddiebergman Oct 2, 2024
07eb8f2
test: Fixups
eddiebergman Oct 2, 2024
39ffe48
fix(optimize_acq): Generation of fixed categorical values
eddiebergman Oct 4, 2024
c3aeb30
test: Fixup examples
eddiebergman Oct 4, 2024
d159651
test(domain): Initial tests
eddiebergman Oct 7, 2024
65d9918
test(ConfigEncoder): Initial tests
eddiebergman Oct 7, 2024
fdfb363
fix(Domain): use cardinality for quantizing through unit interval
eddiebergman Oct 7, 2024
35427eb
test(Samplers): Initial tests and dtype fixes
eddiebergman Oct 7, 2024
d59b134
test(Sampler): Include test file -_-
eddiebergman Oct 7, 2024
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