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Merge pull request nf-core#23 from atrigila/fix_issue21
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Update schema_input_panel.json - Fix issue nf-core#21
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atrigila authored Mar 27, 2024
2 parents cb62a8e + 6153a61 commit d559352
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions assets/schema_input_panel.json
Original file line number Diff line number Diff line change
Expand Up @@ -26,8 +26,8 @@
},
"index": {
"type": "string",
"pattern": "^\\S+\\.(vcf|bcf)\\.(tbi|csi)$",
"errorMessage": "Panel index file must be provided, cannot contain spaces and must have extension '.vcf' or '.bcf' with '.csi' or '.tbi' extension"
"pattern": "^\\S+\\.(vcf|bcf)(\\.gz)?\\.(tbi|csi)$",
"errorMessage": "Panel index file must be provided, cannot contain spaces and must have extension '.vcf' or '.bcf' with optional '.gz' extension and with '.csi' or '.tbi' extension"
}
},
"required": ["panel", "chr", "vcf", "index"]
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