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--- | ||
name: xportr CI/CD Workflows | ||
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on: | ||
# 'push' events are triggered when commits | ||
# are pushed to one of these branches | ||
push: | ||
branches: | ||
- main | ||
tags: | ||
- "v*" | ||
# 'pull_request' events are triggered when PRs are | ||
# created against one of these target branches. | ||
pull_request: | ||
types: | ||
- opened | ||
- synchronize | ||
- reopened | ||
- ready_for_review | ||
branches: | ||
- main | ||
# 'workflow_dispatch' gives you the ability | ||
# to run this workflow on demand, anytime | ||
workflow_dispatch: | ||
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||
concurrency: | ||
group: common-${{ github.event.pull_request.number || github.ref }} | ||
cancel-in-progress: true | ||
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env: | ||
R_VERSION: "release" | ||
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jobs: | ||
# Get R version from environmental variable | ||
# and use it in downstream jobs | ||
get_r_version: | ||
name: Get R version | ||
runs-on: ubuntu-latest | ||
outputs: | ||
r-version: ${{ steps.get_r_version.outputs.R_VERSION }} | ||
steps: | ||
- name: Get R Version for Downstream Container Jobs | ||
id: get_r_version | ||
run: echo "R_VERSION=$R_VERSION" >> $GITHUB_OUTPUT | ||
shell: bash | ||
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||
# Test code coverage of R Package | ||
coverage: | ||
name: Code Coverage | ||
uses: pharmaverse/admiralci/.github/workflows/code-coverage.yml@main | ||
if: > | ||
github.event_name != 'release' | ||
needs: get_r_version | ||
with: | ||
r-version: "${{ needs.get_r_version.outputs.r-version }}" | ||
# Whether to skip code coverage badge creation | ||
# Setting to 'false' will require you to create | ||
# an orphan branch called 'badges' in your repository | ||
skip-coverage-badges: true | ||
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||
# Ensure that styling guidelines are followed | ||
style: | ||
name: Code Style | ||
uses: pharmaverse/admiralci/.github/workflows/style.yml@main | ||
if: github.event_name == 'pull_request' | ||
needs: get_r_version | ||
with: | ||
r-version: "${{ needs.get_r_version.outputs.r-version }}" | ||
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||
# Ensure there are no broken URLs in the package documentation | ||
links: | ||
name: Links | ||
uses: pharmaverse/admiralci/.github/workflows/links.yml@main | ||
if: github.event_name == 'pull_request' | ||
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# Build the website and deploy to `gh-pages` branch | ||
site: | ||
name: Documentation | ||
uses: pharmaverse/admiralci/.github/workflows/pkgdown.yml@main | ||
if: github.event_name == 'push' || startsWith(github.ref, 'refs/tags/v') | ||
needs: get_r_version | ||
with: | ||
r-version: "release" | ||
skip-multiversion-docs: true | ||
secrets: | ||
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
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||
# Ensure there are no linter errors in the package | ||
linter: | ||
name: Lint | ||
uses: pharmaverse/admiralci/.github/workflows/lintr.yml@main | ||
if: github.event_name == 'pull_request' | ||
needs: get_r_version | ||
with: | ||
r-version: "${{ needs.get_r_version.outputs.r-version }}" | ||
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||
# Ensure there are no spelling errors in the package | ||
spellcheck: | ||
name: Spelling | ||
uses: pharmaverse/admiralci/.github/workflows/spellcheck.yml@main | ||
if: github.event_name == 'pull_request' | ||
needs: get_r_version | ||
with: | ||
r-version: "${{ needs.get_r_version.outputs.r-version }}" | ||
|
||
# Bumps development version of the package | ||
vbump: | ||
name: Version Bump 🤜🤛 | ||
if: github.event_name == 'push' | ||
uses: insightsengineering/r.pkg.template/.github/workflows/version-bump.yaml@main | ||
secrets: | ||
REPO_GITHUB_TOKEN: ${{ secrets.REPO_GITHUB_TOKEN }} | ||
|
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