Skip to content

Commit

Permalink
Merge pull request #218 from atorus-research/217_small_typo
Browse files Browse the repository at this point in the history
Closes #217 Fixing a small typo
  • Loading branch information
EeethB authored Jan 18, 2024
2 parents 0501023 + d6daff2 commit b0c8673
Show file tree
Hide file tree
Showing 11 changed files with 33 additions and 39 deletions.
2 changes: 1 addition & 1 deletion .github/pull_request_template.md
Original file line number Diff line number Diff line change
Expand Up @@ -23,7 +23,7 @@ _(descriptions of changes)_
- [ ] Run `devtools::document()` so all `.Rd` files in the `man` folder and the `NAMESPACE` file in the project root are updated appropriately
- [ ] Run `pkgdown::build_site()` and check that all affected examples are displayed correctly and that all new/updated functions occur on the "Reference" page.
- [ ] Update NEWS.md if the changes pertain to a user-facing function (i.e. it has an @export tag) or documentation aimed at users (rather than developers)
- [ ] Make sure that the pacakge version in the NEWS.md and DESCRIPTION file is same. Don't worry about updating the version because it will be auto-updated using the `vbump.yaml` CI.
- [ ] Make sure that the package version in the NEWS.md and DESCRIPTION file is same. Don't worry about updating the version because it will be auto-updated using the `vbump.yaml` CI.
- [ ] Address any updates needed for vignettes and/or templates
- [ ] Link the issue Development Panel so that it closes after successful merging.
- [ ] Fix merge conflicts
Expand Down
2 changes: 1 addition & 1 deletion R/data.R
Original file line number Diff line number Diff line change
Expand Up @@ -95,7 +95,7 @@
#' \item{Purpose}{<chr> Purpose of the dataset}
#' \item{Key, Variables}{<chr> Join Key variables in the dataset}
#' \item{Repeating}{<chr> Indicates if the dataset is repeating}
#' \item{Reference Data}{<lgl> Regerence Data}
#' \item{Reference Data}{<lgl> Reference Data}
#' \item{Comment}{<chr> Additional comment}
#' }
"dataset_spec"
4 changes: 2 additions & 2 deletions R/format.R
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
#'
#' Assigns a SAS format from a variable level metadata to a given data frame. If
#' no format is found for a given variable, it is set as an empty character
#' vector. This is stored in the format.sas attribute.
#' vector. This is stored in the '`format.sas`' attribute.
#'
#' @inheritParams xportr_length
#'
Expand All @@ -19,7 +19,7 @@
#' function.
#'
#' 2) Format Name - passed as the 'xportr.format_name' option.
#' Default: "format". Character values to update the 'format.sas' attribute of
#' Default: "format". Character values to update the '`format.sas`' attribute of
#' the column. This is passed to `haven::write` to note the format.
#'
#' 3) Variable Name - passed as the 'xportr.variable_name' option. Default:
Expand Down
4 changes: 2 additions & 2 deletions R/order.R
Original file line number Diff line number Diff line change
Expand Up @@ -39,8 +39,8 @@
#'
#' 3) Variable Order - passed as the 'xportr.order_name' option.
#' Default: "order". These values used to arrange the order of the variables.
#' If the values of order metadata are not numeric, they will be corsersed to
#' prevent alphabetical sorting of numberic values.
#' If the values of order metadata are not numeric, they will be coerced to
#' prevent alphabetical sorting of numeric values.
#'
#' @return Dataframe that has been re-ordered according to spec
#'
Expand Down
15 changes: 8 additions & 7 deletions R/type.R
Original file line number Diff line number Diff line change
Expand Up @@ -5,15 +5,16 @@
#' 'xportr.character_types' option is used to explicitly collapse the class of a
#' column to character using `as.character`. Similarly, 'xportr.numeric_types'
#' will collapse a column to a numeric type. If no type is passed for a
#' variable and it isn't identifed as a timing variable, it is assumed to be numeric and coerced with `as.numeric`.
#' variable and it isn't identified as a timing variable, it is assumed to be
#' numeric and coerced with `as.numeric`.
#'
#' Certain care should be taken when using timing variables. R serializes dates
#' based on a reference date of 01/01/1970 where XPT uses 01/01/1960. This can
#' result in dates being 10 years off when outputting from R to XPT if you're
#' using a date class. For this reason, `xportr` will try to determine what
#' should happen with variables that appear to be used to denote time.
#'
#' For variables that end in DT, DTM, or, TM, if they are not explicitly noted
#' For variables that end in `DT`, `DTM`, or, `TM`, if they are not explicitly noted
#' in 'xportr.numeric_types' or 'xportr.character_types', they are coerced to
#' numeric results.
#'
Expand All @@ -37,7 +38,7 @@
#' function.
#'
#' 2) Format Name - passed as the 'xportr.format_name' option. Default:
#' "format". Character values to update the 'format.sas' attribute of the
#' "format". Character values to update the '`format.sas`' attribute of the
#' column. This is passed to `haven::write` to note the format.
#'
#' 3) Variable Name - passed as the 'xportr.variable_name' option. Default:
Expand All @@ -48,14 +49,14 @@
#' is used to note the XPT variable "type" options are numeric or character.
#'
#' 5) (Option only) Character Types - The list of classes that should be
#' explicitly coerced to a XPT Character type. Default: c( "character",
#' explicitly coerced to a XPT Character type. Default: `c( "character",
#' "char", "text", "date", "posixct", "posixt", "datetime", "time",
#' "partialdate", "partialtime", "partialdatetime", "incompletedatetime",
#' "durationdatetime", "intervaldatetime")
#' "durationdatetime", "intervaldatetime")`
#'
#' 6) (Option only) Numeric Types - The list of classes that should be
#' explicitly coerced to a XPT numeric type. Default: c("integer", "numeric",
#' "num", "float")
#' explicitly coerced to a XPT numeric type. Default: `c("integer", "numeric",
#' "num", "float")`
#'
#' @return Returns the modified table.
#' @export
Expand Down
10 changes: 5 additions & 5 deletions R/xportr-package.R
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@
#' CDISC complaint data sets in R, to XPT version 5 files. It was designed with
#' options in mind to allow for flexible setting of options while allowing
#' projects and system administrators to set sensible defaults for their
#' orginziations workflows. Below are a list of options that can be set to
#' organizations workflows. Below are a list of options that can be set to
#' customize how `xportr` works in your environment.
#'
#' @section xportr options:
Expand Down Expand Up @@ -64,15 +64,15 @@
#' }
#' \item{
#' xportr.character_types - The default character vector used to explicitly
#' coerce R classes to character XPT types. Default: c("character", "char",
#' coerce R classes to character XPT types. Default: `c("character", "char",
#' "text", "date", "posixct", "posixt", "datetime", "time", "partialdate",
#' "partialtime", "partialdatetime", "incompletedatetime", "durationdatetime",
#' "intervaldatetime")
#' "intervaldatetime")`
#' }
#' \item{
#' xportr.numeric_types - The default character vector used to explicitly
#' coerce R classes to numeric XPT types. Default: c("integer", "numeric",
#' "num", "float")
#' coerce R classes to numeric XPT types. Default: `c("integer", "numeric",
#' "num", "float")`
#' }
#' }
#'
Expand Down
2 changes: 1 addition & 1 deletion man/dataset_spec.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

10 changes: 3 additions & 7 deletions man/xportr-package.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

4 changes: 2 additions & 2 deletions man/xportr_format.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

4 changes: 2 additions & 2 deletions man/xportr_order.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

15 changes: 6 additions & 9 deletions man/xportr_type.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

0 comments on commit b0c8673

Please sign in to comment.