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anne-urai committed Nov 8, 2023
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Expand Up @@ -18,7 +18,7 @@ _See [here](https://anne-urai.github.io/lab_wiki/IBLdata.html) for some examples
- How do decision-making strategies (such as perseverance) change with ageing? Fit behavioral models (e.g. [Ashwood et al. 2022](https://www.nature.com/articles/s41593-021-01007-z), [Findling et al. 2019](https://doi.org/10.1038/s41593-019-0518-9)) to decision-making data across the lifespan (both mice and humans). Potential collaboration with Peter Murphy, Dublin.
- Do learning and decision-making vary with the biological clock, and is it easier to learn when consistently practicing at the same time of day? Potential collaboration with [Christian Tudorache](https://www.universiteitleiden.nl/en/staffmembers/christian-tudorache#tab-1).
- How can we disentangle choice updating from slow drifts in decision criterion? Apply method proposed by [Gupta and Brody](https://www.biorxiv.org/content/10.1101/2021.09.17.460767v1), with Robin Vloeberghs.
- How much are human perceptual decisions affected by distinct states/epochs in behavior? Apply GLM-HMM method from [Ashwood et al](https://www.nature.com/articles/s41593-021-01007-z) (code [here](https://github.com/int-brain-lab/GLM-HMM/tree/main)) to open data from [the confidence database](https://www.nature.com/articles/s41562-019-0813-1) or [this longitudinal dataset])(https://github.com/roeysc/dynamic_computational_phenotyping) with many different tasks.
- How much are human perceptual decisions affected by distinct states/epochs in behavior? Apply GLM-HMM method from [Ashwood et al](https://www.nature.com/articles/s41593-021-01007-z) (code [here](https://github.com/int-brain-lab/GLM-HMM/tree/main)) to open data from [the confidence database](https://www.nature.com/articles/s41562-019-0813-1) or [this longitudinal dataset](https://github.com/roeysc/dynamic_computational_phenotyping) with many different tasks.
- Fit data from [Gupta et al](https://doi.org/10.1101/2023.01.18.524599) with a history-dependent DDM, does the pattern found in [humans and mice](https://2023.ccneuro.org/view_paper.php?PaperNum=1119) also hold in rats?
- Can we detect cognitive strategies using constrained RNNs? Fit new models (e.g. [here](https://www.biorxiv.org/content/10.1101/2023.04.12.536629v2), [here](https://www.biorxiv.org/content/10.1101/2023.05.17.541226v1), [here](https://www.biorxiv.org/content/10.1101/2023.06.23.546250v1), [tutorial](https://github.com/kstach01/CogModelingRNNsTutorial)) to perceptual decision-making data.
- Do mice show the same history-dependent choice history bias as humans? Implement [this work](https://2023.ccneuro.org/proceedings/0000544.pdf) in the new [HSSM package](https://github.com/lnccbrown/HSSM) and be a beta-tester. Together with Alex Fengler, Brown University.
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