Skip to content
View alejoe91's full-sized avatar

Organizations

@SpikeInterface

Block or report alejoe91

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
Showing results

A Python-based module for creating flexible and robust spike sorting pipelines.

Python 549 190 Updated Jan 10, 2025

AIND pipeline for processing extracellular electrophysiology data

Nextflow 7 3 Updated Jan 9, 2025

Package for automatic post-processing and merging of multiple spike-sorting analyses.

Python 25 3 Updated Jun 13, 2024

An automated, end-to-end, machine-learning-based spike sorting pipeline following the DeepCluster method

Jupyter Notebook 6 Updated Dec 23, 2024

NWB GUIDE is a desktop app that provides a no-code user interface for converting neurophysiology data to NWB.

JavaScript 22 4 Updated Jan 13, 2025

Quantized Fourier Compression of Timeseries Data with Application to Electrophysiology

Python 3 Updated Aug 7, 2024

NEural MOdelS, a statistical modeling framework for neuroscience.

Python 84 8 Updated Jan 10, 2025

Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF

Jupyter Notebook 96 44 Updated Jan 7, 2025

Browser-based NWB visualization and DANDI exploration

TypeScript 50 6 Updated Dec 27, 2024

Analyze neuroscience data in the cloud

TypeScript 19 2 Updated Sep 6, 2024

Typed Argument Parsing with Pydantic

Python 109 19 Updated Dec 23, 2024

Fast spike sorting with drift correction

Python 497 252 Updated Jan 3, 2025

Repository to track review of NWB Extension Proposals (NWBEPs)

1 1 Updated Jan 4, 2025

pathlib api extended to use fsspec backends

Python 263 42 Updated Jan 13, 2025

PYthon Neural Analysis Package 🍍

Python 290 63 Updated Jan 13, 2025

Collection of standardized analysis pipelines based on SpikeInterface

Python 3 Updated Sep 3, 2024
AGS Script 4 Updated Jun 7, 2024

Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats

Python 331 249 Updated Jan 13, 2025

CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.

Python 11 3 Updated Feb 7, 2024
Python 1 1 Updated Oct 6, 2023

Code to create geometry files for sorting from SpikeGLX metadata

Python 6 3 Updated Jul 19, 2023

Lossless event based rotary encoder+button library for Arduino and Teensy

C++ 37 8 Updated Jun 19, 2024

Gaussian process current source density estimation

Python 9 Updated Oct 14, 2021

Standard MIDI Files (SMF) Processing Library

C++ 112 38 Updated Dec 7, 2024

Repository for collecting analytics and scripts related to the NWB project.

Jupyter Notebook 1 1 Updated Jan 13, 2025

MIDI for Arduino

C++ 1,632 259 Updated Oct 16, 2023

Spike sorting : how good are we to correct for motion ?

Jupyter Notebook 6 1 Updated Oct 17, 2023

Collection of probe description for probeinterface

Python 9 7 Updated Dec 9, 2024

A tool to streamline extracellular electrophysiology analysis using SpikeInterface

Python 13 Updated Jan 6, 2025
Next
Showing results