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Dark matter

A collection of Python tools for filtering and visualizing Next Generation Sequencing reads.

Requires Python 2.7 to 3.5.

Installation

Linux, OS X, Windows.

iPython Notebook

If you are using dark matter in an iPython Notebook, you should install the requirements in requirements-ipynb.txt.

Development

If you are using dark matter as a developer, you should install the requirements in requirements-dev.txt.

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  • Python 95.9%
  • C 3.9%
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