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Update version number and changelog
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emilhaegglund committed Mar 29, 2017
1 parent 09d93ce commit a738092
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6 changes: 4 additions & 2 deletions CanSNPer/__main__.py
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CanSNPer: A toolkit for SNP-typing using NGS data.
Copyright (C) 2016 Adrian Lärkeryd
VERSION 1.0.8
VERSION 1.0.9
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
Expand Down Expand Up @@ -376,7 +376,9 @@ def import_sequence(file_name, config, c):
seq_file = open(file_name, "r")
seq = "".join(seq_file.read().split("\n")[1:])
seq_file.close()

print(seq)
print(len(seq))
print("Here is error")
# Going to search for ATCGN and see if that is all we find
sequence_validation_regex = re.compile("[ATCGN]+")
validation_search = sequence_validation_regex.search(seq)
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4 changes: 4 additions & 0 deletions changelog
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2017-03-29 Emil Hägglund <[email protected]> & Andreas Sjödin <[email protected]>
CanSNPer version 1.0.9
* Added Dockerfile

2016-11-25 Emil Hägglund <[email protected]> & Andreas Sjödin <[email protected]>
CanSNPer version 1.0.8
* bug fix release
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2 changes: 1 addition & 1 deletion setup.py
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setup(
name="CanSNPer",
version="1.0.8",
version="1.0.9",
url="https://github.com/adrlar/CanSNPer",
description="CanSNPer: A toolkit for SNP-typing using NGS data.",
license="GPL'",
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