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fix backup paths

fix backup paths #369

Workflow file for this run

name: 'Build, test and deploy OpenAtlas'
on:
push: {}
workflow_call: {}
repository_dispatch:
types: [run]
workflow_dispatch: {}
jobs:
setup_workflow_env:
runs-on: ubuntu-latest
outputs:
environment: ${{ steps.get_environment_from_git_ref.outputs.environment }}
environment_short: ${{ steps.get_environment_from_git_ref.outputs.environment_short }}
image_name: container-preview
registry_root: ghcr.io/${{ github.repository }}/
default_port: "5000"
APP_NAME: OpenAtlas
APP_ROOT: "/"
steps:
- name: Get environment from git ref
id: get_environment_from_git_ref
run: |
echo "Running on branch ${{ github.ref_name }}"
if [ "${{ github.ref }}" = "refs/heads/main" ]; then
echo "environment=production"
echo "environment=production" >> $GITHUB_OUTPUT
echo "environment_short=prod" >> $GITHUB_OUTPUT
else
echo "environment=review/${{ github.ref_name }}"
echo "environment=review/${{ github.ref_name }}" >> $GITHUB_OUTPUT
echo "environment_short=$(echo -n ${{ github.ref_name }} | sed s/feature_// | tr '_' '-' | tr '[:upper:]' '[:lower:]' )" >> $GITHUB_OUTPUT
fi
build_openatlas:
needs: [setup_workflow_env]
environment: ${{ needs.setup_workflow_env.outputs.environment }}
permissions:
packages: write
contents: read
runs-on: ubuntu-latest
steps:
- name: Checkout
uses: actions/checkout@v3
- name: Login to GitHub Container Registry
uses: docker/login-action@v2
with:
registry: ghcr.io
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Create tags based on git data
id: meta
uses: docker/metadata-action@v4
with:
images: |
${{ needs.setup_workflow_env.outputs.registry_root }}${{ needs.setup_workflow_env.outputs.image_name }}
tags: |
type=ref,event=branch
type=ref,event=pr
type=semver,pattern={{version}}
type=semver,pattern={{major}}.{{minor}}
type=raw,value=latest,enable={{is_default_branch}}
type=raw,value={{sha}}
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v2
- name: Build and push
uses: docker/build-push-action@v3
with:
context: .
file: install/Dockerfile
platforms: linux/amd64
push: true
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=gha
cache-to: type=gha,mode=max
test_openatlas:
env:
POSTGRES_PASSWORD: verysecret
POSTGRES_DB: openatlas_test
POSTGRES_USER: openatlas
runs-on: ubuntu-latest
needs: [setup_workflow_env, build_openatlas]
environment: ${{ needs.setup_workflow_env.outputs.environment }}
steps:
- name: Checkout
uses: actions/checkout@v3
- name: Login to GitHub Container Registry
uses: docker/login-action@v2
with:
registry: ghcr.io
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Fetch container image built above
run: |
container_name_tag="$(echo -n '${{ needs.setup_workflow_env.outputs.registry_root }}${{ needs.setup_workflow_env.outputs.image_name }}' | tr '_' '-' | tr '[:upper:]' '[:lower:]'):$(git rev-parse --short HEAD)"
docker pull $container_name_tag
docker tag $container_name_tag openatlas-openatlas
docker tag $container_name_tag openatlas-initdb
- name: Docker compose
run: |
docker compose up --detach
- name: Docker service overview
run: |
docker ps
docker network ls
- name: File folders ownership
run: |
ls -la
sudo chown -R 33:33 ./files/uploads
sudo chown -R 33:33 ./files/processed_images/resized
sudo chown -R 33:33 ./files/export
- name: Write testing.py
run: |
set -x
cat <<EOF > testing.py
SERVER_NAME='local.host'
DATABASE_NAME='${{env.POSTGRES_DB}}'
DATABASE_USER='${{env.POSTGRES_USER}}'
DATABASE_HOST='postgres'
DATABASE_PORT=5432
DATABASE_PASS='${{env.POSTGRES_PASSWORD}}'
MAIL_PASSWORD='asdQWEtzu123'
SECRET_KEY='$(< /dev/urandom tr -dc _A-Z-a-z-0-9 | head -c 32;echo;)' # Used for cookies
DEBUG = True
WTF_CSRF_ENABLED = False
WTF_CSRF_METHODS: list[str] = []
ARCHE = {
'id': 0,
'url': 'https://arche-curation.acdh-dev.oeaw.ac.at/'}
IIIF = {
'enabled': True,
'path': '/var/www/iipsrv/',
'url': 'http://localhost:8080/iiif/',
'version': 2,
'conversion': True,
'compression': 'jpeg'}
EOF
sudo chown 33:33 testing.py
docker cp -a testing.py openatlas-openatlas-1:/var/www/openatlas/instance/
docker exec -i openatlas-openatlas-1 /bin/bash -c "cd /var/www/openatlas/install/ && sed -i 's@http://localhost/iiif/@http://localhost:8080/iiif/@g' data_test.sql"
docker exec -i openatlas-openatlas-1 /bin/bash -c "cd /var/www/openatlas/instance/ && ls -la && cat testing.py && cat production.py"
- name: Run tests
run: |
docker exec -i openatlas-openatlas-1 /bin/bash -c "cd /var/www/openatlas/tests && nosetests3 -c .noserc --verbosity=2 --nologcapture --nocapture && echo passed"
_3:
needs: [setup_workflow_env, test_openatlas]
uses: acdh-oeaw/gl-autodevops-minimal-port/.github/workflows/deploy.yml@main
secrets: inherit
if: ${{ github.repository_owner == 'acdh-oeaw' }}
with:
environment: ${{ needs.setup_workflow_env.outputs.environment}}
DOCKER_TAG: ${{ needs.setup_workflow_env.outputs.registry_root }}${{ needs.setup_workflow_env.outputs.image_name }}
APP_NAME: ${{ needs.setup_workflow_env.outputs.APP_NAME }}-${{ needs.setup_workflow_env.outputs.environment_short }}
APP_ROOT: ${{ needs.setup_workflow_env.outputs.APP_ROOT }}
default_port: ${{ needs.setup_workflow_env.outputs.default_port}}
with_db_demo_deploy:
needs: [setup_workflow_env, test_openatlas]
uses: acdh-oeaw/gl-autodevops-minimal-port/.github/workflows/deploy.yml@main
secrets: inherit
if: ${{ github.repository_owner == 'acdh-oeaw' }}
with:
environment: review/with_db_demo_deploy
do_deploy: ${{ needs.setup_workflow_env.outputs.environment == 'review/feature_docker_k8s' }}
DOCKER_TAG: ${{ needs.setup_workflow_env.outputs.registry_root }}${{ needs.setup_workflow_env.outputs.image_name }}
APP_NAME: ${{ needs.setup_workflow_env.outputs.APP_NAME }}-with_db_demo_deploy
APP_ROOT: ${{ needs.setup_workflow_env.outputs.APP_ROOT }}
default_port: ${{ needs.setup_workflow_env.outputs.default_port}}
openatlas_demo:
needs: [setup_workflow_env, test_openatlas]
uses: acdh-oeaw/gl-autodevops-minimal-port/.github/workflows/deploy.yml@main
secrets: inherit
if: ${{ github.repository_owner == 'acdh-oeaw' }}
with:
environment: openatlas-demo
do_deploy: ${{ needs.setup_workflow_env.outputs.environment == 'review/feature_docker_k8s' }}
DOCKER_TAG: ${{ needs.setup_workflow_env.outputs.registry_root }}${{ needs.setup_workflow_env.outputs.image_name }}
APP_NAME: ${{ needs.setup_workflow_env.outputs.APP_NAME }}-openatlas-demo
APP_ROOT: ${{ needs.setup_workflow_env.outputs.APP_ROOT }}
default_port: ${{ needs.setup_workflow_env.outputs.default_port}}