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1. Ecogenomics/GTDBTk Ecogenomics/GTDBTk Public

   GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

   Python 488 82

2. PhyloDM PhyloDM Public

   Efficient calculation of phylogenetic distance matrices.

   Rust 45 2

3. magna magna Public

   A collection of bioinformatic datasets and utilities I use in my everyday life.

   Python 2 1

4. metatree metatree Public

   Visualisation of polyphyletic groups between phylogenetic trees to a reference tree.

   Python 2

5. VTracker VTracker Public

   For tracking the relationship between group membership changes across versions.

   Python 3

6. rsrq rsrq Public

   A minimal Redis-backed job queue.

   Rust