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Eric Kofman
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,280 @@ | ||
| name: marine_environment | ||
| channels: | ||
| - anaconda | ||
| - bioconda | ||
| - r | ||
| - defaults | ||
| - conda-forge | ||
| dependencies: | ||
| - _libgcc_mutex=0.1=conda_forge | ||
| - _openmp_mutex=4.5=2_gnu | ||
| - abseil-cpp=20211102.0=h27087fc_1 | ||
| - anndata=0.9.2=pyhd8ed1ab_0 | ||
| - anyio=3.5.0=py38h06a4308_0 | ||
| - argon2-cffi=21.3.0=pyhd3eb1b0_0 | ||
| - argon2-cffi-bindings=21.2.0=py38h7f8727e_0 | ||
| - arpack=3.8.0=nompi_h0baa96a_101 | ||
| - arrow-cpp=11.0.0=h374c478_2 | ||
| - asttokens=2.0.5=pyhd3eb1b0_0 | ||
| - async-lru=2.0.4=py38h06a4308_0 | ||
| - attrs=23.1.0=py38h06a4308_0 | ||
| - aws-c-common=0.6.8=h5eee18b_1 | ||
| - aws-c-event-stream=0.1.6=h6a678d5_6 | ||
| - aws-checksums=0.1.11=h5eee18b_2 | ||
| - aws-sdk-cpp=1.8.185=h721c034_1 | ||
| - babel=2.11.0=py38h06a4308_0 | ||
| - backcall=0.2.0=pyhd3eb1b0_0 | ||
| - backports=1.0=pyhd8ed1ab_3 | ||
| - backports.zoneinfo=0.2.1=py38h01eb140_8 | ||
| - beautifulsoup4=4.12.2=py38h06a4308_0 | ||
| - bedtools=2.31.1=hf5e1c6e_0 | ||
| - blas=1.0=mkl | ||
| - bleach=4.1.0=pyhd3eb1b0_0 | ||
| - boost-cpp=1.84.0=h44aadfe_0 | ||
| - bottleneck=1.3.5=py38h7deecbd_0 | ||
| - brotli=1.0.9=he6710b0_2 | ||
| - brotli-python=1.0.9=py38h6a678d5_7 | ||
| - bzip2=1.0.8=h7f98852_4 | ||
| - c-ares=1.21.0=hd590300_0 | ||
| - ca-certificates=2024.2.2=hbcca054_0 | ||
| - cached-property=1.5.2=hd8ed1ab_1 | ||
| - cached_property=1.5.2=pyha770c72_1 | ||
| - certifi=2024.2.2=pyhd8ed1ab_0 | ||
| - cffi=1.15.1=py38h5eee18b_3 | ||
| - charset-normalizer=2.0.4=pyhd3eb1b0_0 | ||
| - colorama=0.4.6=pyhd8ed1ab_0 | ||
| - comm=0.1.2=py38h06a4308_0 | ||
| - contourpy=1.0.5=py38hdb19cb5_0 | ||
| - cryptography=41.0.3=py38hdda0065_0 | ||
| - cycler=0.11.0=pyhd3eb1b0_0 | ||
| - cyrus-sasl=2.1.28=h52b45da_1 | ||
| - dbus=1.13.18=hb2f20db_0 | ||
| - debugpy=1.6.7=py38h6a678d5_0 | ||
| - decorator=5.1.1=pyhd3eb1b0_0 | ||
| - defusedxml=0.7.1=pyhd3eb1b0_0 | ||
| - executing=0.8.3=pyhd3eb1b0_0 | ||
| - expat=2.5.0=h6a678d5_0 | ||
| - fontconfig=2.14.2=h14ed4e7_0 | ||
| - fonttools=4.25.0=pyhd3eb1b0_0 | ||
| - freetype=2.12.1=h4a9f257_0 | ||
| - get-annotations=0.1.2=pyhd8ed1ab_0 | ||
| - gflags=2.2.2=he1b5a44_1004 | ||
| - giflib=5.2.1=h5eee18b_3 | ||
| - glib=2.69.1=he621ea3_2 | ||
| - glog=0.5.0=h48cff8f_0 | ||
| - glpk=5.0=h445213a_0 | ||
| - gmp=6.3.0=h59595ed_0 | ||
| - grpc-cpp=1.48.2=he1ff14a_1 | ||
| - gst-plugins-base=1.14.1=h6a678d5_1 | ||
| - gstreamer=1.14.1=h5eee18b_1 | ||
| - h5py=3.8.0=nompi_py38hd5fa8ee_100 | ||
| - hdf5=1.12.2=nompi_h4df4325_101 | ||
| - icu=73.2=h59595ed_0 | ||
| - idna=3.4=py38h06a4308_0 | ||
| - igraph=0.10.8=h52253d4_1 | ||
| - importlib-metadata=6.0.0=py38h06a4308_0 | ||
| - importlib_metadata=6.0.0=hd3eb1b0_0 | ||
| - importlib_resources=6.1.1=py38h06a4308_1 | ||
| - intel-openmp=2023.1.0=hdb19cb5_46305 | ||
| - ipykernel=6.26.0=pyhf8b6a83_0 | ||
| - ipython=8.12.2=py38h06a4308_0 | ||
| - ipywidgets=8.0.4=py38h06a4308_0 | ||
| - jedi=0.18.1=py38h06a4308_1 | ||
| - jinja2=3.1.2=py38h06a4308_0 | ||
| - joblib=1.3.2=pyhd8ed1ab_0 | ||
| - jpeg=9e=h5eee18b_1 | ||
| - json5=0.9.6=pyhd3eb1b0_0 | ||
| - jsonschema=4.19.2=py38h06a4308_0 | ||
| - jsonschema-specifications=2023.7.1=py38h06a4308_0 | ||
| - jupyter=1.0.0=py38h06a4308_8 | ||
| - jupyter-lsp=2.2.0=py38h06a4308_0 | ||
| - jupyter_client=8.1.0=py38h06a4308_0 | ||
| - jupyter_console=6.6.3=py38h06a4308_0 | ||
| - jupyter_core=5.3.0=py38h06a4308_0 | ||
| - jupyter_events=0.8.0=py38h06a4308_0 | ||
| - jupyter_server=2.10.0=py38h06a4308_0 | ||
| - jupyter_server_terminals=0.4.4=py38h06a4308_1 | ||
| - jupyterlab=4.0.8=py38h06a4308_0 | ||
| - jupyterlab_pygments=0.1.2=py_0 | ||
| - jupyterlab_server=2.25.1=py38h06a4308_0 | ||
| - jupyterlab_widgets=3.0.9=py38h06a4308_0 | ||
| - kiwisolver=1.4.4=py38h6a678d5_0 | ||
| - krb5=1.20.1=h143b758_1 | ||
| - lcms2=2.12=h3be6417_0 | ||
| - ld_impl_linux-64=2.40=h41732ed_0 | ||
| - leidenalg=0.10.2=py38h17151c0_0 | ||
| - libaec=1.1.2=h59595ed_1 | ||
| - libblas=3.9.0=1_h86c2bf4_netlib | ||
| - libboost=1.84.0=h6fcfa73_0 | ||
| - libboost-devel=1.84.0=h00ab1b0_0 | ||
| - libboost-headers=1.84.0=ha770c72_0 | ||
| - libbrotlicommon=1.0.9=h166bdaf_9 | ||
| - libbrotlidec=1.0.9=h166bdaf_9 | ||
| - libbrotlienc=1.0.9=h166bdaf_9 | ||
| - libclang=14.0.6=default_hc6dbbc7_1 | ||
| - libclang13=14.0.6=default_he11475f_1 | ||
| - libcups=2.4.2=h2d74bed_1 | ||
| - libcurl=8.4.0=h251f7ec_0 | ||
| - libdeflate=1.18=h0b41bf4_0 | ||
| - libedit=3.1.20221030=h5eee18b_0 | ||
| - libev=4.33=h516909a_1 | ||
| - libevent=2.1.10=h28343ad_4 | ||
| - libffi=3.4.2=h7f98852_5 | ||
| - libgcc-ng=13.2.0=h807b86a_2 | ||
| - libgfortran-ng=11.2.0=h00389a5_1 | ||
| - libgfortran5=11.2.0=h1234567_1 | ||
| - libgomp=13.2.0=h807b86a_2 | ||
| - libiconv=1.17=hd590300_2 | ||
| - liblapack=3.9.0=5_h92ddd45_netlib | ||
| - libleidenalg=0.11.1=h00ab1b0_0 | ||
| - libllvm14=14.0.6=hdb19cb5_3 | ||
| - libnghttp2=1.57.0=h2d74bed_0 | ||
| - libnsl=2.0.1=hd590300_0 | ||
| - libpng=1.6.39=h5eee18b_0 | ||
| - libpq=12.15=hdbd6064_1 | ||
| - libprotobuf=3.20.3=he621ea3_0 | ||
| - libsodium=1.0.18=h7b6447c_0 | ||
| - libsqlite=3.44.0=h2797004_0 | ||
| - libssh2=1.11.0=h0841786_0 | ||
| - libstdcxx-ng=13.2.0=h7e041cc_3 | ||
| - libthrift=0.15.0=h362ad58_1 | ||
| - libtiff=4.2.0=hecacb30_2 | ||
| - libuuid=2.38.1=h0b41bf4_0 | ||
| - libwebp=1.3.2=h11a3e52_0 | ||
| - libwebp-base=1.3.2=h5eee18b_0 | ||
| - libxcb=1.15=h7f8727e_0 | ||
| - libxkbcommon=1.6.0=hd429924_1 | ||
| - libxml2=2.12.4=h232c23b_1 | ||
| - libzlib=1.2.13=hd590300_5 | ||
| - llvmlite=0.41.1=py38h94a1851_0 | ||
| - lz4-c=1.9.4=h6a678d5_0 | ||
| - markupsafe=2.1.3=py38h5eee18b_0 | ||
| - matplotlib=3.7.2=py38h06a4308_0 | ||
| - matplotlib-base=3.7.2=py38h1128e8f_0 | ||
| - matplotlib-inline=0.1.6=py38h06a4308_0 | ||
| - mistune=2.0.4=py38h06a4308_0 | ||
| - mkl=2023.1.0=h213fc3f_46343 | ||
| - mkl-service=2.4.0=py38h5eee18b_1 | ||
| - mkl_fft=1.3.8=py38h5eee18b_0 | ||
| - mkl_random=1.2.4=py38hdb19cb5_0 | ||
| - munkres=1.1.4=py_0 | ||
| - mysql=5.7.24=h721c034_2 | ||
| - natsort=8.4.0=pyhd8ed1ab_0 | ||
| - nbclient=0.8.0=py38h06a4308_0 | ||
| - nbconvert=7.10.0=py38h06a4308_0 | ||
| - nbformat=5.9.2=py38h06a4308_0 | ||
| - ncurses=6.4=h59595ed_2 | ||
| - nest-asyncio=1.5.6=py38h06a4308_0 | ||
| - networkx=3.1=pyhd8ed1ab_0 | ||
| - notebook=7.0.6=py38h06a4308_0 | ||
| - notebook-shim=0.2.3=py38h06a4308_0 | ||
| - numba=0.58.1=py38h4144172_0 | ||
| - numexpr=2.8.4=py38hc78ab66_1 | ||
| - numpy=1.24.3=py38hf6e8229_1 | ||
| - numpy-base=1.24.3=py38h060ed82_1 | ||
| - openjpeg=2.4.0=h3ad879b_0 | ||
| - openssl=3.2.1=hd590300_0 | ||
| - orc=1.7.4=hb3bc3d3_1 | ||
| - overrides=7.4.0=py38h06a4308_0 | ||
| - packaging=23.1=py38h06a4308_0 | ||
| - pandas=2.0.3=py38h1128e8f_0 | ||
| - pandocfilters=1.5.0=pyhd3eb1b0_0 | ||
| - parso=0.8.3=pyhd3eb1b0_0 | ||
| - patsy=0.5.6=pyhd8ed1ab_0 | ||
| - pcre=8.45=h295c915_0 | ||
| - pexpect=4.8.0=pyhd3eb1b0_3 | ||
| - pickleshare=0.7.5=pyhd3eb1b0_1003 | ||
| - pillow=10.0.1=py38ha6cbd5a_0 | ||
| - pip=23.3.1=pyhd8ed1ab_0 | ||
| - pkgutil-resolve-name=1.3.10=py38h06a4308_1 | ||
| - platformdirs=3.10.0=py38h06a4308_0 | ||
| - ply=3.11=py38_0 | ||
| - polars=0.19.12=py38h9fbb5ac_0 | ||
| - pooch=1.7.0=py38h06a4308_0 | ||
| - prometheus_client=0.14.1=py38h06a4308_0 | ||
| - prompt-toolkit=3.0.36=py38h06a4308_0 | ||
| - prompt_toolkit=3.0.36=hd3eb1b0_0 | ||
| - psutil=5.9.0=py38h5eee18b_0 | ||
| - ptyprocess=0.7.0=pyhd3eb1b0_2 | ||
| - pure_eval=0.2.2=pyhd3eb1b0_0 | ||
| - pyarrow=11.0.0=py38h468efa6_1 | ||
| - pybedtools=0.9.1=py38he0f268d_0 | ||
| - pycparser=2.21=pyhd3eb1b0_0 | ||
| - pygments=2.15.1=py38h06a4308_1 | ||
| - pynndescent=0.5.11=pyhca7485f_0 | ||
| - pyopenssl=23.2.0=py38h06a4308_0 | ||
| - pyparsing=3.0.9=py38h06a4308_0 | ||
| - pyqt=5.15.10=py38h6a678d5_0 | ||
| - pyqt5-sip=12.13.0=py38h5eee18b_0 | ||
| - pysam=0.22.0=py38h15b938a_0 | ||
| - pysocks=1.7.1=py38h06a4308_0 | ||
| - python=3.8.18=hd12c33a_0_cpython | ||
| - python-dateutil=2.8.2=pyhd3eb1b0_0 | ||
| - python-fastjsonschema=2.16.2=py38h06a4308_0 | ||
| - python-igraph=0.11.3=py38h886cfa5_1 | ||
| - python-json-logger=2.0.7=py38h06a4308_0 | ||
| - python-tzdata=2023.3=pyhd3eb1b0_0 | ||
| - python_abi=3.8=4_cp38 | ||
| - pytz=2023.3.post1=py38h06a4308_0 | ||
| - pyyaml=6.0.1=py38h5eee18b_0 | ||
| - pyzmq=25.1.0=py38h6a678d5_0 | ||
| - qt-main=5.15.2=h53bd1ea_10 | ||
| - qtconsole=5.5.0=py38h06a4308_0 | ||
| - qtpy=2.4.1=py38h06a4308_0 | ||
| - re2=2022.04.01=h27087fc_0 | ||
| - readline=8.2=h8228510_1 | ||
| - referencing=0.30.2=py38h06a4308_0 | ||
| - requests=2.31.0=py38h06a4308_0 | ||
| - rfc3339-validator=0.1.4=py38h06a4308_0 | ||
| - rfc3986-validator=0.1.1=py38h06a4308_0 | ||
| - rpds-py=0.10.6=py38hb02cf49_0 | ||
| - scanpy=1.9.6=pyhd8ed1ab_1 | ||
| - scikit-learn=1.3.2=py38ha25d942_2 | ||
| - scipy=1.10.1=py38hf6e8229_1 | ||
| - seaborn=0.13.1=hd8ed1ab_0 | ||
| - seaborn-base=0.13.1=pyhd8ed1ab_0 | ||
| - send2trash=1.8.2=py38h06a4308_0 | ||
| - session-info=1.0.0=pyhd8ed1ab_0 | ||
| - setuptools=68.2.2=pyhd8ed1ab_0 | ||
| - sip=6.7.12=py38h6a678d5_0 | ||
| - six=1.16.0=pyhd3eb1b0_1 | ||
| - snappy=1.1.9=h295c915_0 | ||
| - sniffio=1.2.0=py38h06a4308_1 | ||
| - soupsieve=2.5=py38h06a4308_0 | ||
| - sqlite=3.41.2=h5eee18b_0 | ||
| - stack_data=0.2.0=pyhd3eb1b0_0 | ||
| - statsmodels=0.14.1=py38h7f0c24c_0 | ||
| - stdlib-list=0.10.0=pyhd8ed1ab_0 | ||
| - tbb=2021.8.0=hdb19cb5_0 | ||
| - terminado=0.17.1=py38h06a4308_0 | ||
| - texttable=1.7.0=pyhd8ed1ab_0 | ||
| - threadpoolctl=3.2.0=pyha21a80b_0 | ||
| - tinycss2=1.2.1=py38h06a4308_0 | ||
| - tk=8.6.13=h2797004_0 | ||
| - tomli=2.0.1=py38h06a4308_0 | ||
| - tornado=6.3.3=py38h5eee18b_0 | ||
| - tqdm=4.66.1=pyhd8ed1ab_0 | ||
| - traitlets=5.7.1=py38h06a4308_0 | ||
| - typing-extensions=4.7.1=py38h06a4308_0 | ||
| - typing_extensions=4.7.1=py38h06a4308_0 | ||
| - tzdata=2023c=h71feb2d_0 | ||
| - umap-learn=0.5.5=py38h578d9bd_0 | ||
| - urllib3=1.26.18=py38h06a4308_0 | ||
| - utf8proc=2.6.1=h27cfd23_0 | ||
| - wcwidth=0.2.5=pyhd3eb1b0_0 | ||
| - webencodings=0.5.1=py38_1 | ||
| - websocket-client=0.58.0=py38h06a4308_4 | ||
| - wheel=0.41.3=pyhd8ed1ab_0 | ||
| - widgetsnbextension=4.0.5=py38h06a4308_0 | ||
| - xkeyboard-config=2.40=hd590300_0 | ||
| - xorg-kbproto=1.0.7=h7f98852_1002 | ||
| - xorg-libx11=1.8.7=h8ee46fc_0 | ||
| - xorg-libxau=1.0.11=hd590300_0 | ||
| - xorg-xextproto=7.3.0=h0b41bf4_1003 | ||
| - xorg-xproto=7.0.31=h7f98852_1007 | ||
| - xz=5.2.6=h166bdaf_0 | ||
| - yaml=0.2.5=h7b6447c_0 | ||
| - zeromq=4.3.4=h2531618_0 | ||
| - zipp=3.11.0=py38h06a4308_0 | ||
| - zlib=1.2.13=hd590300_5 | ||
| - zstd=1.5.5=hfc55251_0 |