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@VirologyCharite

Institute of Virology, Charité, Berlin

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  1. SARS-CoV-2-VL-paper SARS-CoV-2-VL-paper Public

    Data and files from the May 25, 2021 SARS-CoV-2 viral load and infectiousness paper

    HTML 9 2

  2. gb2seq gb2seq Public

    Use a GenBank file to extract sequences for features and other information from another genome

    Python 7 1

  3. convert-spread3 convert-spread3 Public

    A horrible shell script hack to convert SpreadD3 output files for Christian

    JavaScript 6

  4. python-testing-course-2022 python-testing-course-2022 Public

    Notes from an intro course on testing in Python

    Makefile 5

  5. 2020-berlin-python-course 2020-berlin-python-course Public

    Python 2

  6. sars2seq sars2seq Public

    A Python library and command-line scripts for working with SARS-CoV-2 sequences

    Python 2

Repositories

Showing 10 of 35 repositories
  • gb2seq Public

    Use a GenBank file to extract sequences for features and other information from another genome

    VirologyCharite/gb2seq’s past year of commit activity
    Python 7 1 2 0 Updated Jan 25, 2025
  • niklib Public

    Python bin/lib/test demo code for Niklas Endres

    VirologyCharite/niklib’s past year of commit activity
    Python 0 0 0 0 Updated Oct 30, 2024
  • VirologyCharite/antigenic-cartography-introduction-hu’s past year of commit activity
    0 0 0 0 Updated Sep 19, 2024
  • VirologyCharite/ConsensusDeduplication’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Aug 27, 2024
  • VirologyCharite/diamond-sensitivity’s past year of commit activity
    Python 0 0 0 0 Updated Aug 3, 2024
  • VirologyCharite/2024-berlin-python-course’s past year of commit activity
    1 0 0 0 Updated Jul 8, 2024
  • charite-hamster-map-2024 Public

    Data and code for "Antigenic cartography using variant-specific hamster sera reveals substantial antigenic variation among Omicron subvariants"

    VirologyCharite/charite-hamster-map-2024’s past year of commit activity
    R 0 1 0 0 Updated Jun 26, 2024
  • sars-cov-2-agrdt-study Public

    Code and partial data for manuscript "SARS-CoV-2 rapid antigen test sensitivity and viral load in freshly symptomatic hospital employees in Berlin, Germany, December 2020 to February 2022 - an observational study".

    VirologyCharite/sars-cov-2-agrdt-study’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated May 13, 2024
  • python-line-counting Public

    Scripts for counting non-blank non-comment lines in Python and Jupyter notebook files

    VirologyCharite/python-line-counting’s past year of commit activity
    Shell 0 0 0 0 Updated May 7, 2024
  • VirologyCharite/minor-variants’s past year of commit activity
    Python 0 0 0 0 Updated Apr 26, 2024

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