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Update test_r.yaml
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Test running it
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jbousquin authored Jan 17, 2024
1 parent 0e359f6 commit 0c38a81
Showing 1 changed file with 6 additions and 1 deletion.
7 changes: 6 additions & 1 deletion .github/workflows/test_r.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -39,7 +39,7 @@ jobs:
with:
r-version: 'release'

- uses: r-lib/actions/setup-pandoc@v1
- uses: r-lib/actions/setup-pandoc@v2

- name: Update pip and install testing pkgs
run: |
Expand All @@ -58,5 +58,10 @@ jobs:
python -m pip install --no-deps .
pip install -r requirements.txt
- name: point R to pip env
run: |
install.packages("reticulate")
import("harmonize_wq")
- name: Run pytest
run: pytest -v harmonize_wq

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