Fix CI to use pyproject.toml

.github/workflows/benchmark.yml

@@ -15,18 +15,15 @@ jobs:
         python-version: ['3.10']
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
-        python -m pip install pytest
-        if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
-        python setup.py develop
-        pip install pytest-benchmark
+        python -m pip install .[tests]
     - name: Benchmark with pytest
       run: |
         pytest tests/test_db_benchmark.py --benchmark-json output.json

.github/workflows/coveralls.yml

@@ -18,17 +18,16 @@ jobs:
         python-version: ['3.10']
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
-        python -m pip install flake8 pytest
-        if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
-        python -m pip install --editable .
+        python -m pip install flake8
+        python -m pip install --editable .[tests]
         cd tests/cannonsim/src; make; cd ../../..
         pip install pytest-cov
         pip install coveralls

.github/workflows/pdocs.yml

@@ -13,16 +13,15 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - name: Set up Python
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v5
       with:
         python-version: '3.x'
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
-        if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
-        python -m pip install --editable .
+        python -m pip install --editable .[docs]
         cd tests/cannonsim/src; make; cd ../../.. 
         pip install pdoc
     - name: Checkout

.github/workflows/python-package.yml

@@ -18,17 +18,16 @@ jobs:
         python-version: ['3.8', '3.9', '3.10', '3.11']
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
-        python -m pip install flake8 pytest
-        if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
-        python -m pip install --editable .
+        python -m pip install flake8
+        python -m pip install --editable .[tests]
         cd tests/cannonsim/src; make; cd ../../..
         pip install pytest-cov
         pip install coveralls

.github/workflows/pythonpublish.yml

@@ -13,19 +13,22 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - name: Set up Python
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v5
       with:
         python-version: '3.x'
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
-        pip install setuptools wheel twine
+        pip install build twine
+    - name: Build package
+      run: python -m build --sdist --wheel
+    - name: Check package
+      run: python -m twine check dist/*
     - name: Build and publish
       env:
         TWINE_USERNAME: ${{ secrets.PYPI_USERNAME }}
         TWINE_PASSWORD: ${{ secrets.PYPI_PASSWORD }}
       run: |
-        python setup.py sdist bdist_wheel
         twine upload dist/*