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update docs
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lappalainenj committed Oct 24, 2024
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14 changes: 7 additions & 7 deletions docs/docs/index.md
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Expand Up @@ -55,13 +55,13 @@ A good starting point is also the [pipeline manager](reference/scripts/scripts/p

Try the models and code inside our Google Colab notebooks for a quickstart.

- [Explore the connectome](https://colab.research.google.com/drive/16xi96XS3whNhwMNeFihBNNgADVh60XHH?usp=sharing)
- [Provide custom stimuli](https://colab.research.google.com/drive/1xBJ-xLgmLGhXgkf8XLw2PRRlDrYQ1Hhv?usp=sharing)
- [Optic flow task]()
- [Flash responses]()
- [Moving edge responses]()
- [Umap and clustering]()
- [Maximally excitatory stimuli]()
- [Explore the connectome](https://colab.research.google.com/github/TuragaLab/flyvis/blob/main/examples/01_flyvision_connectome.ipynb)
- [Optic flow task](https://colab.research.google.com/github/TuragaLab/flyvis/blob/main/examples/02_flyvision_optic_flow_task.ipynb)
- [Flash responses](https://colab.research.google.com/github/TuragaLab/flyvis/blob/main/examples/03_flyvision_flash_responses.ipynb)
- [Moving edge responses](https://colab.research.google.com/github/TuragaLab/flyvis/blob/main/examples/04_flyvision_moving_edge_responses.ipynb)
- [Umap and clustering](https://colab.research.google.com/github/TuragaLab/flyvis/blob/main/examples/05_flyvision_umap_and_clustering_models.ipynb)
- [Maximally excitatory stimuli](https://colab.research.google.com/github/TuragaLab/flyvis/blob/main/examples/06_flyvision_maximally_excitatory_stimuli.ipynb)
- [Provide custom stimuli](https://colab.research.google.com/github/TuragaLab/flyvis/blob/main/examples/07_flyvision_providing_custom_stimuli.ipynb)

### Local Installation

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3 changes: 0 additions & 3 deletions docs/docs/reference/utils.md
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Expand Up @@ -236,9 +236,6 @@
options:
heading_level: 4

::: flyvision.utils.dataset_utils.download_sintel
options:
heading_level: 4

::: flyvision.utils.dataset_utils.get_random_data_split
options:
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4 changes: 2 additions & 2 deletions flyvision/connectome/connectome.py
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Expand Up @@ -1353,10 +1353,10 @@ def _projective_fields_edge_dfs(


def get_avgfilt_connectome(config: dict) -> ConnectomeView:
"""Create a ConnectomeView instance from a network directory.
"""Create a ConnectomeView instance from a config for ConnectomeFromAvgFilters.
Args:
network_dir: Directory containing network configuration.
config: Containing ConnectomeFromAvgFilters configuration.
Returns:
ConnectomeView instance.
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