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Fix .readthedocs.yaml and bump version (#517) #504

Fix .readthedocs.yaml and bump version (#517)

Fix .readthedocs.yaml and bump version (#517) #504

Workflow file for this run

name: Continuous Integration
# Controls when the action will run.
on:
# Triggers the workflow on push or pull request events but only for the master branch
push:
branches: [ master ]
pull_request:
branches: [ master ]
paths-ignore:
- '*.md'
# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:
# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
build-py:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: [3.8, 3.9, '3.10', 3.11]
env:
UCI_DB: "https://archive.ics.uci.edu/ml/machine-learning-databases"
PROPUBLICA_GH: "https://raw.githubusercontent.com/propublica/compas-analysis/bafff5da3f2e45eca6c2d5055faad269defd135a"
# Steps represent a sequence of tasks that will be executed as part of the job
steps:
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
- name: Check out repo
uses: actions/checkout@v3
- name: Set up R
uses: r-lib/actions/setup-r@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v3
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
sudo apt install libglpk-dev libxml2-dev
python -m pip install --upgrade pip setuptools wheel
pip install -e '.[all]'
pip install flake8
pip list
python -m rpy2.situation
- name: Download datasets
run: |
wget ${UCI_DB}/adult/adult.data -P aif360/data/raw/adult/
wget ${UCI_DB}/adult/adult.test -P aif360/data/raw/adult/
wget ${UCI_DB}/adult/adult.names -P aif360/data/raw/adult/
wget ${UCI_DB}/statlog/german/german.data -P aif360/data/raw/german/
wget ${UCI_DB}/statlog/german/german.doc -P aif360/data/raw/german/
wget ${PROPUBLICA_GH}/compas-scores-two-years.csv -P aif360/data/raw/compas/
wget ${UCI_DB}/00222/bank-additional.zip -P aif360/data/raw/bank/ && unzip -j aif360/data/raw/bank/bank-additional.zip -d aif360/data/raw/bank/ && rm aif360/data/raw/bank/bank-additional.zip
(cd aif360/data/raw/meps;Rscript generate_data.R <<< y)
- name: Lint with flake8
run: |
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Test with pytest
run: pytest tests --cov=aif360 --cov-report=term-missing
build-r:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: [3.8, 3.9, '3.10', 3.11]
steps:
- name: Check out repo
uses: actions/checkout@v3
- name: Set up R
uses: r-lib/actions/setup-r@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v3
with:
python-version: ${{ matrix.python-version }}
- name: Install R dependencies
run: install.packages(c("reticulate", "rstudioapi", "testthat"))
shell: Rscript {0}
- name: Install Python dependencies
run: |
python -m pip install --upgrade pip setuptools wheel
pip install '.[all]'
- name: Install R package
run: R CMD INSTALL aif360/aif360-r