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Update gh-pages to output generated at b8b32c1
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ktpolanski committed Nov 8, 2023
1 parent 4d834e6 commit e814456
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2 changes: 1 addition & 1 deletion modules/sctk.clusterwise_qc.html
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Expand Up @@ -150,7 +150,7 @@ <h1>sctk.clusterwise_qc<a class="headerlink" href="#sctk-clusterwise-qc" title="
<span class="gp">&gt;&gt;&gt; </span><span class="n">metrics_list</span> <span class="o">=</span> <span class="p">[</span><span class="s2">&quot;n_counts&quot;</span><span class="p">,</span> <span class="s2">&quot;n_genes&quot;</span><span class="p">,</span> <span class="s2">&quot;percent_mito&quot;</span><span class="p">,</span> <span class="s2">&quot;percent_ribo&quot;</span><span class="p">,</span> <span class="s2">&quot;percent_hb&quot;</span><span class="p">]</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">sctk</span><span class="o">.</span><span class="n">generate_qc_clusters</span><span class="p">(</span><span class="n">adata</span><span class="p">,</span> <span class="n">metrics</span><span class="o">=</span><span class="n">metrics_list</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">sctk</span><span class="o">.</span><span class="n">cellwise_qc</span><span class="p">(</span><span class="n">adata</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">sctk</span><span class="o">.</span><span class="n">clusterwise_wc</span><span class="p">(</span><span class="n">adata</span><span class="p">)</span>
<span class="gp">&gt;&gt;&gt; </span><span class="n">sctk</span><span class="o">.</span><span class="n">clusterwise_qc</span><span class="p">(</span><span class="n">adata</span><span class="p">)</span>
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