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Experiments to investigate the effect of recombination on ML trees

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What is the effect of recombination on ML trees?

Install

You'll need seqgen:

$ pip install seqgen

Install RAxML. If on a mac with brew you can just run brew install raxml-ng.

Install phyml. If on a mac with brew you can just run brew install phyml.

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Experiments to investigate the effect of recombination on ML trees

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