Run GillesPy2 Integration Tests

Updating depricated code #467

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Job	Run time
run-tests (ubuntu-latest)	6m 58s
run-tests (ubuntu-latest)	6m 58s
run-tests (ubuntu-latest)	8m 3s
run-tests (ubuntu-latest)	1s
run-tests (ubuntu-latest)	1s
run-tests (ubuntu-latest)	8m 0s
run-tests (macos-latest)	6m 41s
run-tests (macos-latest)	6m 16s
run-tests (macos-latest)	6m 16s
run-tests (macos-latest)	6m 16s
run-tests (macos-latest)	6m 16s
run-tests (macos-latest)	6m 16s
run-tests (windows-latest)	6m 45s
run-tests (windows-latest)	6m 45s
run-tests (windows-latest)	6m 45s
run-tests (windows-latest)	6m 45s
run-tests (windows-latest)	6m 45s
run-tests (windows-latest)	6m 45s
	1h 48m 32s