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[pre-commit.ci] pre-commit autoupdate #342

[pre-commit.ci] pre-commit autoupdate

[pre-commit.ci] pre-commit autoupdate #342

Workflow file for this run

# https://docs.github.com/en/actions
# https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python
name: test
on:
push:
branches: [main]
pull_request:
branches: [main]
jobs:
test:
# Step 1. Set up operating system
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ubuntu-latest, windows-latest]
python-version: ["3.9", "3.10", "3.11"]
exclude:
- os: windows-latest
python-version: "3.9"
steps:
# Step 2. Check-out repository so we can access its contents
- uses: actions/checkout@v3
# Step 3. Set up Python 3.9
- uses: actions/setup-python@v5
with:
python-version: 3.9
# step 4. Install the dependencies from requirements.txt file
- name: Install dependencies
run: |
python -m pip install --upgrade pip setuptools wheel
pip install flake8 pytest pytest-cov
pip install -r requirements/test.txt
# Step 5. Install the package
- name: Install package
run: |
pip install -e .
# Step 6. Lint the files with flake8
- name: Lint with flake8
run: |
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
continue-on-error: true
# Step 7. Run the tests
- name: Test with pytest
run: |
pytest tests/ --cov=pynamer --cov-report xml:coverage.xml
# Step 8. Use Codecov to track coverage
- uses: codecov/codecov-action@v4
with:
file: ./coverage.xml
fail_build_if_error: true