Update release notes

doc/releases/0.101.1.rst

@@ -3,28 +3,35 @@
 SpikeInterface 0.101.1 release notes
 ------------------------------------
 
-6th September 2024
+13th September 2024
 
 Main changes:
 
-*
+* Enabled support for consolidated Zarr-backend for `SortingAnalyzer`, including cloud support (#3314, #3318, #3349, #3351)
+* Improved support for Kilosort4 **ONLY VERSIONS >= 4.0.16** (#3339, #3276)
+* Skip recomputation of quality and template metrics if already computed (#3292)
+* Dropped support for Python<3.9 (#3267)
 
 core:
 
-* Add `BaseRecording.reset_times()` function (#3363)
+* Fix proposal for channel location when probegroup (#3392)
+* Fix time handling test memory (#3379)
+* Add `BaseRecording.reset_times()` function (#3363, #3380, #3391)
+* Extend `estimate_sparsity` methods and fix from_ptp (#3369)
 * Add `load_sorting_analyzer_or_waveforms` function (#3352)
-* Propagate storage_options to load_sorting_analyzer (#3351)
 * Fix zarr folder suffix handling (#3349)
+* Analyzer extension exit status (#3347)
 * Lazy loading of zarr timestamps (#3318)
-* Enable cloud-loading for analyzer Zarr (#3314)
+* Enable cloud-loading for analyzer Zarr (#3314, #3351, #3378)
 * Refactor `set_property` in base (#3287)
 * Job kwargs fix (#3259)
-* Add check for None in 'NoiseGeneratorRecordingSegment' get_traces(). (#3230)
+* Add `is_filtered` to annotations in `binary.json` (#3245)
+* Add check for None in `NoiseGeneratorRecordingSegment`` get_traces() (#3230)
 
 extractors:
 
+* Load phy channel_group as group (#3368)
 * "quality" property to be read as string instead of object in `BasePhyKilosortSortingExtractor` (#3365)
-* Test IBL skip when the setting up the one client fails (#3289)
 
 preprocessing:
 
@@ -33,18 +40,25 @@ preprocessing:
 
 sorters:
 
-* fix: download apptainer images without docker client (#3335)
+* Updates to kilosort 4: version >= 4.0.16, `bad_channels`, `clear_cache`, `use_binary_file` (#3339)
+* Download apptainer images without docker client (#3335)
 * Expose save preprocessing in ks4 (#3276)
 * Fix KS2/2.5/3 skip_kilosort_preprocessing (#3265)
-* added lowpass parameter, fixed verbose option (#3262)
+* HS: Added lowpass parameter, fixed verbose option (#3262)
 * Now exclusive support for HS v0.4 (Lightning) (#3210)
 * Add kilosort4 wrapper tests (#3085)
 
 postprocessing:
 
+* Add extra protection for template metrics (#3364)
 * Protect median against nans in get_prototype_spike (#3270)
 * Fix docstring and error for spike_amplitudes (#3269)
 
+qualitymetrics:
+
+* Do not delete quality and template metrics on recompute (#3292)
+* Refactor quality metrics tests to use fixture (#3249)
+
 
 curation:
 
@@ -56,15 +70,17 @@ widgets:
 
 * Fix widgets tests and add test on unit_table_properties (#3354)
 * Allow quality and template metrics in sortingview's unit table (#3299)
-* Fix #3236 (#3238)
+* Add subwidget parameters for UnitSummaryWidget (#3242)
+* Fix `ipympl`/`widget` backend check (#3238)
 
-sortingcomponents:
+generators:
 
-* Update doc handle drift  + better preset (#3232)
+* Handle case where channel count changes from probeA to probeB (#3237)
 
-motion correction:
+sortingcomponents:
 
-* Make InterpolateMotionRecording not JSON-serializable (#3341)
+* Update doc handle drift  + better preset (#3232)
+* Make `InterpolateMotionRecording`` not JSON-serializable (#3341)
 
 documentation:
 
@@ -87,14 +103,19 @@ continuous integration:
 
 packaging:
 
+* Minor typing fixes (#3374)
 * Drop python 3.8 in pyproject.toml (#3267)
 
 testing:
 
+* Fix time handling test memory (#3379)
 * Fix streaming extractor condition in the CI (#3362)
 * Test IBL skip when the setting up the one client fails (#3289)
 * Refactor `set_property` in base (#3287)
+* Refactor quality metrics tests to use fixture (#3249)
 * Add kilosort4 wrapper tests (#3085)
+* Test IBL skip when the setting up the one client fails (#3289)
+
 
 Contributors:
 
@@ -104,7 +125,10 @@ Contributors:
 * @alejoe91
 * @app/pre-commit-ci
 * @chrishalcrow
+* @cwindolf
+* @florian6973
 * @h-mayorquin
+* @jiumao2
 * @jonahpearl
 * @mhhennig
 * @rkim48

doc/whatisnew.rst

@@ -47,7 +47,12 @@ Release notes
 Version 0.101.1
 ===============
 
+Minor release with bug fixes and minor improvements:
 
+* Enabled support for consolidated Zarr-backend for `SortingAnalyzer`, including cloud support (#3314, #3318, #3349, #3351)
+* Improved support for Kilosort4 **ONLY VERSIONS >= 4.0.16** (#3339, #3276)
+* Skip recomputation of quality and template metrics if already computed (#3292)
+* Dropped support for Python<3.9 (#3267)
 
 
 Version 0.101.0