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Merge pull request #3085 from JoeZiminski/add_kilosort4_wrapper_tests
Add kilosort4 wrapper tests
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This folder contains test scripts for running in the CI, that are not run as part of the usual | ||
CI because they are too long / heavy. These are run on cron-jobs once per week. |
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import os | ||
import re | ||
from pathlib import Path | ||
import requests | ||
import json | ||
from packaging.version import parse | ||
import spikeinterface | ||
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def get_pypi_versions(package_name): | ||
""" | ||
Make an API call to pypi to retrieve all | ||
available versions of the kilosort package. | ||
""" | ||
url = f"https://pypi.org/pypi/{package_name}/json" | ||
response = requests.get(url) | ||
response.raise_for_status() | ||
data = response.json() | ||
versions = list(sorted(data["releases"].keys())) | ||
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assert parse(spikeinterface.__version__) < parse("0.101.1"), ( | ||
"Kilosort 4.0.5-12 are supported in SpikeInterface < 0.101.1." | ||
"At version 0.101.1, this should be updated to support newer" | ||
"kilosort verrsions." | ||
) | ||
versions = [ver for ver in versions if parse("4.0.12") >= parse(ver) >= parse("4.0.5")] | ||
return versions | ||
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if __name__ == "__main__": | ||
# Get all KS4 versions from pipi and write to file. | ||
package_name = "kilosort" | ||
versions = get_pypi_versions(package_name) | ||
with open(Path(os.path.realpath(__file__)).parent / "kilosort4-latest-version.json", "w") as f: | ||
print(versions) | ||
json.dump(versions, f) |
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["4.0.10", "4.0.11", "4.0.12", "4.0.5", "4.0.6", "4.0.7", "4.0.8", "4.0.9"] |
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