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Dredge lfp and dredge ap #5055

Dredge lfp and dredge ap

Dredge lfp and dredge ap #5055

name: Test streaming extractors
on:
pull_request:
types: [synchronize, opened, reopened]
branches:
- main
concurrency: # Cancel previous workflows on the same pull request
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
test-streaming-extractors:
name: Testing using ${{ matrix.os }} with ${{ matrix.python-version }}
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: ["ubuntu-latest"]
python-version: ["3.10"]
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- uses: s-weigand/setup-conda@v1
with:
update-conda: true
python-version: ${{ matrix.python-version }}
conda-channels: conda-forge
- name: Get changed files
id: changed-files
uses: tj-actions/changed-files@v41
- name: Module changes
id: modules-changed
run: |
for file in ${{ steps.changed-files.outputs.all_changed_files }}; do
if [[ $file == *"/nwbextractors.py" || $file == *"/iblstreamingrecording.py"* ]]; then
echo "Streaming files changed changed"
echo "STREAMING_CHANGED=true" >> $GITHUB_OUTPUT
fi
done
- name: Install package and streaming extractor dependencies
if: ${{ steps.modules-changed.outputs.STREAMING_CHANGED == 'true' }}
run: pip install -e .[test_core,streaming_extractors]
- name: run tests
if: steps.modules-changed.outputs.STREAMING_CHANGED == 'true'
run: pytest -m "streaming_extractors" -vv -ra