updated links

docs/_config.yml

@@ -26,12 +26,14 @@ search_enabled: true
 
 # Aux links for the upper right navigation
 aux_links:
-  "JPR Articles":
+  "DO-MS Articles":
     - "https://do-ms.slavovlab.net/#research-articles"
   "GitHub Repository":
     - "https://github.com/SlavovLab/DO-MS"
   "Slavov Lab":
-    - "http://slavovlab.net"
+    - "https://slavovlab.net"
+  "SCP Hub":
+    - "https://scp.slavovlab.net"
 
 github_link: https://github.com/SlavovLab/DO-MS
 preprint_link: https://www.biorxiv.org/content/10.1101/2023.02.02.526809v1

docs/_layouts/default.html

@@ -12,7 +12,7 @@
         {% include nav.html %}
       </div>
       <footer role="contentinfo" class="site-footer">
-        <p class="text-small text-grey-dk-000 mb-0">This site uses <a href="https://github.com/pmarsceill/just-the-docs">Just the Docs</a>, a documentation theme for Jekyll.</p>
+        <p class="text-small text-grey-dk-000 mb-0">Resources from the <a href="https://slavovlab.net">Slavov Lab</a></p>
       </footer>
     </div>
     <div class="main-content-wrap js-main-content" tabindex="0">

docs/mass-spec/methods.md

@@ -22,7 +22,8 @@ DO-MS supports related methods and technologies developed in the [Slavov Laborat
 * [Single-Cell ProtEomics by Mass Spectrometry (SCoPE-MS)](https://scp.slavovlab.net/SCoPE-MS)
 * [Single-Cell ProtEomics by Mass Spectrometry (SCoPE2)](https://scope2.slavovlab.net)
 * [Data-driven Alignment of Retention Times for IDentification (DART-ID)](https://dart-id.slavovlab.net)
-* [Prioritized Single-Cell ProtEomics by Mass Spectrometry (pSCoPE)](https://scp.slavovlab.net/pSCoPE) 
+* [Prioritized Single-Cell ProtEomics by Mass Spectrometry (pSCoPE)](https://scp.slavovlab.net/pSCoPE)
+* [Multiplexed DIA (plexDIA) ](https://scp.slavovlab.net/plexDIA)