refactor: prep for unified dataset schema

migrations/20240920111733-dataset-unified-schema.js

@@ -0,0 +1,47 @@
+module.exports = {
+  async up(db, client) {
+    // TODO write your migration here.
+    // See https://github.com/seppevs/migrate-mongo/#creating-a-new-migration-script
+    // Example:
+    // await db.collection('albums').updateOne({artist: 'The Beatles'}, {$set: {blacklisted: true}});
+    await db.collection("Dataset").updateMany({}, [
+      {
+        $set: {
+          proposalIds: ["$proposalId"],
+          instrumentIds: ["$instrumentId"],
+          sampleIds: ["$sampleId"],
+        },
+      },
+    ]);
+    await db.collection("Dataset").updateMany({ type: "derived" }, [
+      {
+        $set: {
+          principalInvestigator: "$investigator",
+        },
+      },
+    ]);
+  },
+
+  async down(db, client) {
+    // TODO write the statements to rollback your migration (if possible)
+    // Example:
+    // await db.collection('albums').updateOne({artist: 'The Beatles'}, {$set: {blacklisted: false}});
+
+    await db.collection("Dataset").updateMany({}, [
+      {
+        $set: {
+          proposalId: "$proposalIds[0]",
+          instrumentId: "$instrumentId[0]",
+          sampleId: "$sampleId[0]",
+        },
+      },
+    ]);
+    await db.collection("Dataset").updateMany({ type: "derived" }, [
+      {
+        $set: {
+          investigator: "$principalInvestigator",
+        },
+      },
+    ]);
+  },
+};

package.json

@@ -26,7 +26,7 @@
     "test:debug": "node --inspect-brk -r tsconfig-paths/register -r ts-node/register node_modules/.bin/jest --runInBand",
     "test:api": "npm run test:api:jest --maxWorkers=50% && concurrently -k -s first \"wait-on http://localhost:3000/explorer/ && npm run test:api:mocha\" \"npm run start\"",
     "test:api:jest": "jest --config ./test/config/jest-e2e.json --maxWorkers=50%",
-    "test:api:mocha": "mocha --config ./test/config/.mocharc.json -r chai/register-should.js ",
+    "test:api:mocha": "mocha --config ./test/config/.mocharc.json -r chai/register-should.js",
     "prepare:local": "docker-compose -f CI/E2E/docker-compose-local.yaml --env-file CI/E2E/.env.elastic-search up  -d && cp functionalAccounts.json.test functionalAccounts.json"
   },
   "dependencies": {