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Merge pull request #32 from Sage-Bionetworks/folder_structure_data_size
[IBCDPE-832] Add script to get data size for Synapse entity
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/* | ||
This is a script to calculate total data size in GiB for each ENTITY_ID (folder or project). | ||
ENTITY_IDs can be a single Synapse folder/project ID or a list of Synapse folder/proejct IDs seperated by comma | ||
*/ | ||
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USE ROLE DATA_ANALYTICS; | ||
USE DATABASE synapse_data_warehouse; | ||
USE WAREHOUSE COMPUTE_XSMALL; | ||
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-- The list of folders to be checked | ||
SET | ||
ENTITY_IDs = ''; | ||
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-- Calculate Data Size | ||
WITH RECURSIVE nodesnapshots | ||
-- Column list of the "view" | ||
( | ||
ID, | ||
PARENT_ID, | ||
NAME, | ||
NODE_TYPE, | ||
FILE_HANDLE_ID, | ||
ENTITY_ID | ||
) | ||
AS | ||
-- Common Table Expression | ||
( | ||
-- Anchor Clause | ||
SELECT | ||
ID, | ||
PARENT_ID, | ||
NAME, | ||
NODE_TYPE, | ||
FILE_HANDLE_ID, | ||
ID AS ENTITY_ID | ||
FROM | ||
synapse_data_warehouse.synapse.node_latest | ||
WHERE | ||
ID IN ( | ||
SELECT | ||
REPLACE(VALUE, 'syn', '') | ||
FROM | ||
TABLE(SPLIT_TO_TABLE($ENTITY_IDs, ',')) | ||
) | ||
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UNION ALL | ||
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-- Recursive Clause | ||
SELECT | ||
node.ID, | ||
node.PARENT_ID, | ||
node.NAME, | ||
node.NODE_TYPE, | ||
node.FILE_HANDLE_ID, | ||
nodesnapshots.ENTITY_ID | ||
FROM | ||
synapse_data_warehouse.synapse.node_latest AS node | ||
JOIN | ||
nodesnapshots | ||
ON | ||
node.PARENT_ID = nodesnapshots.ID | ||
) | ||
-- This is the "main select". | ||
SELECT | ||
'syn' || nodesnapshots.ENTITY_ID AS ENTITY_ID, | ||
sum(filesnapshots.CONTENT_SIZE)/ power(2, 30) AS CONTENT_SIZE_in_GiB | ||
FROM | ||
nodesnapshots | ||
JOIN | ||
synapse_data_warehouse.synapse.file_latest AS filesnapshots | ||
ON | ||
nodesnapshots.file_handle_id = filesnapshots.ID | ||
GROUP BY | ||
nodesnapshots.ENTITY_ID; |