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Update #1204

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Oct 7, 2024
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Update #1204

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1237ab9
Update CHANGELOG.md
alexhbnr Oct 7, 2024
8a80ded
Replace data_publication_doi with publication_doi
alexhbnr Oct 7, 2024
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4 changes: 3 additions & 1 deletion CHANGELOG.md
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Expand Up @@ -23,6 +23,8 @@ and this project follows to [Calendar Versioning](https://calver.org/).

### Changed

- Update the data_publication_doi of Lebrasseur 2024 10.1093/ve/vead087 (@alexhbnr)

### Removed

## v24.06: Su Nuraxi di Barumini
Expand All @@ -37,7 +39,7 @@ and this project follows to [Calendar Versioning](https://calver.org/).

- Sun 2024 10.1038/s41467-024-47358-6 (added by @aidaanva)
- Urban 2024 10.1016/j.cub.2024.04.006 (added by @aidaanva)
- Lebrasseur 2024 10.1093/ve/vead087(added by @YuejiaoHuang)
- Lebrasseur 2024 10.1093/ve/vead087 (added by @YuejiaoHuang)

#### Ancient Metagenome: Environmental

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10 changes: 5 additions & 5 deletions ...entsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv
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Expand Up @@ -3100,11 +3100,11 @@ Sun2024 2024 10.1038/s41467-024-47358-6 XBQM20 GSA PRJCA020853 SAMC3135942 XBQM2
Sun2024 2024 10.1038/s41467-024-47358-6 XBQM46 GSA PRJCA020853 SAMC3135943 XBQM46 double PfuTurbo Cx Hotstart DNA full-udg HiSeq X Ten SINGLE Targeted-Capture 16540 CRR927092 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927092/CRR927092.fastq.gz 8abe20d7ad71529e7606cf357155ccbc 3868947
Sun2024 2024 10.1038/s41467-024-47358-6 XBQM125 GSA PRJCA020853 SAMC3135944 XBQM125 double PfuTurbo Cx Hotstart DNA none HiSeq X Ten SINGLE Targeted-Capture 343 CRR927093 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927093/CRR927093.fastq.gz 45efa889dc53958b1e64eb13b3a4fbb2 90445
Sun2024 2024 10.1038/s41467-024-47358-6 11KBM13 GSA PRJCA020853 SAMC3135945 11KBM13 double PfuTurbo Cx Hotstart DNA half-udg HiSeq X Ten SINGLE Targeted-Capture 1690 CRR927094 fastq_mapped ftp://download.big.ac.cn/gsa2/CRA013222/CRR927094/CRR927094.fastq.gz c7360f598593b3e4980300f34bca35e4 254052
Lebrasseur2024 2024 10.1038/s41586-021-04018-9 UR17x29 ENA PRJEB44430 ERS7256200 L5 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 145317698 ERR6466112 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/002/ERR6466112/ERR6466112.fastq.gz e4e00eb66e236b20020f6d12323ff24d 5064443689
Lebrasseur2024 2024 10.1038/s41586-021-04018-9 UR17x29 ENA PRJEB44430 ERS7256200 L3 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 164415447 ERR6466110 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/000/ERR6466110/ERR6466110.fastq.gz 3387cbb54cd5593384586c3f70787405 6026604046
Lebrasseur2024 2024 10.1038/s41586-021-04018-9 UR17x29 ENA PRJEB44430 ERS7256200 L1 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 9413628 ERR6466108 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/008/ERR6466108/ERR6466108.fastq.gz 082fa661d3351c0fac22e2e922dc3795 342573885
Lebrasseur2024 2024 10.1038/s41586-021-04018-9 UR17x29 ENA PRJEB44430 ERS7256200 L2 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 123717709 ERR6466109 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/009/ERR6466109/ERR6466109.fastq.gz 267fe0d4b684a1cf765ae560abdfbbc3 4352735230
Lebrasseur2024 2024 10.1038/s41586-021-04018-9 UR17x29 ENA PRJEB44430 ERS7256200 L4 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 141415855 ERR6466111 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/001/ERR6466111/ERR6466111.fastq.gz 7bed95eb12f3d17c93fd6d47c5edfd04 4974034411
Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L5 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 145317698 ERR6466112 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/002/ERR6466112/ERR6466112.fastq.gz e4e00eb66e236b20020f6d12323ff24d 5064443689
Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L3 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 164415447 ERR6466110 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/000/ERR6466110/ERR6466110.fastq.gz 3387cbb54cd5593384586c3f70787405 6026604046
Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L1 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 9413628 ERR6466108 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/008/ERR6466108/ERR6466108.fastq.gz 082fa661d3351c0fac22e2e922dc3795 342573885
Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L2 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 123717709 ERR6466109 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/009/ERR6466109/ERR6466109.fastq.gz 267fe0d4b684a1cf765ae560abdfbbc3 4352735230
Lebrasseur2024 2024 10.1093/ve/vead087 UR17x29 ENA PRJEB44430 ERS7256200 L4 double AccuPrime Pfx DNA half-udg Illumina HiSeq 4000 SINGLE WGS 141415855 ERR6466111 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR646/001/ERR6466111/ERR6466111.fastq.gz 7bed95eb12f3d17c93fd6d47c5edfd04 4974034411
White2021 2021 10.3390/biology10121324 B2_B3 ENA PRJEB49091 ERS9769380 L022 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 172363072 ERR13663673 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/073/ERR13663673/ERR13663673_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/073/ERR13663673/ERR13663673_2.fastq.gz 93fe32a1e7baafdbe2ab5fde69a6d998;47cf6d5fec371200015a493a0839c828 4381516936;4643855551
White2021 2021 10.3390/biology10121324 B2_B5 ENA PRJEB49091 ERS9769381 L023 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 165002236 ERR13663674 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/074/ERR13663674/ERR13663674_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/074/ERR13663674/ERR13663674_2.fastq.gz 370f2ee1d8d3929d4999d1ef6ba795f5;0390ac309d270d11f8ef01d1a98fe74f 4143803128;4491981331
White2021 2021 10.3390/biology10121324 B2_B6 ENA PRJEB49091 ERS9769382 L024 double AmpliTaq Gold DNA none Illumina HiSeq 4000 PAIRED WGS 164114498 ERR13663676 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/076/ERR13663676/ERR13663676_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR136/076/ERR13663676/ERR13663676_2.fastq.gz abafcc2b76f2d56f01e5c6ed95f0f20c;e65f30975fa8ff540a9083b77b25646b 4147933772;4482524602
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