Merge pull request #1196 from SPAAM-community/czechia

Replace Czech Republic with Czechia
SPAAM-community · Oct 3, 2024 · c1e88b8 · c1e88b8
2 parents 7f27956 + 3d3fe9b
commit c1e88b8
Show file tree

Hide file tree

Showing 19 changed files with 730 additions and 661 deletions.
diff --git a/ancientmetagenome-hostassociated/samples/ancientmetagenome-hostassociated_samples.tsv b/ancientmetagenome-hostassociated/samples/ancientmetagenome-hostassociated_samples.tsv
@@ -863,10 +863,10 @@ FellowsYates2021	2021	10.1073/pnas.2021655118	El Collado	38.919	-0.121	Spain	ECO
 FellowsYates2021	2021	10.1073/pnas.2021655118	El Collado	38.919	-0.121	Spain	ECO010.B	Homo sapiens	9000	10.1073/pnas.2021655118	oral	dental calculus	ENA	PRJEB34569	ERS3774463
 FellowsYates2021	2021	10.1073/pnas.2021655118	El Mirón	38.919	-0.121	Spain	EMN001.A	Homo sapiens	9000	10.1073/pnas.2021655118	oral	dental calculus	ENA	PRJEB34569	ERS3774464
 FellowsYates2021	2021	10.1073/pnas.2021655118	Mota	7.29	37.47	Ethiopia	MOA001.A	Homo sapiens	4500	10.1073/pnas.2021655118	oral	dental calculus	ENA	PRJEB34569	ERS3774465
-FellowsYates2021	2021	10.1073/pnas.2021655118	Dolní Věstonice II	48.883	16.65	Czech Republic	DLV001.A	Homo sapiens	31000	10.1073/pnas.2021655118	oral	dental calculus	ENA	PRJEB34569	ERS3774466
-FellowsYates2021	2021	10.1073/pnas.2021655118	Dolní Věstonice II	48.883	16.650086	Czech Republic	DLV002.A	Homo sapiens	31000	10.1073/pnas.2021655118	oral	dental calculus	ENA	PRJEB34569	ERS3774467
+FellowsYates2021	2021	10.1073/pnas.2021655118	Dolní Věstonice II	48.883	16.65	Czechia	DLV001.A	Homo sapiens	31000	10.1073/pnas.2021655118	oral	dental calculus	ENA	PRJEB34569	ERS3774466
+FellowsYates2021	2021	10.1073/pnas.2021655118	Dolní Věstonice II	48.883	16.650086	Czechia	DLV002.A	Homo sapiens	31000	10.1073/pnas.2021655118	oral	dental calculus	ENA	PRJEB34569	ERS3774467
 FellowsYates2021	2021	10.1073/pnas.2021655118	Größe Ofnethöhle	48.818	10.45	Germany	OFN001.A	Homo sapiens	9200	10.1073/pnas.2021655118	oral	dental calculus	ENA	PRJEB34569	ERS3774468
-FellowsYates2021	2021	10.1073/pnas.2021655118	Pavlov I	48.873	16.672	Czech Republic	PLV001.A	Homo sapiens	29500	10.1073/pnas.2021655118	oral	dental calculus	ENA	PRJEB34569	ERS3774469
+FellowsYates2021	2021	10.1073/pnas.2021655118	Pavlov I	48.873	16.672	Czechia	PLV001.A	Homo sapiens	29500	10.1073/pnas.2021655118	oral	dental calculus	ENA	PRJEB34569	ERS3774469
 FellowsYates2021	2021	10.1073/pnas.2021655118	Grotte de Rigney	47.383	6.166	France	RIG001.A	Homo sapiens	15400	10.1073/pnas.2021655118	oral	dental calculus	ENA	PRJEB34569	ERS3774470
 FellowsYates2021	2021	10.1073/pnas.2021655118	Essaouira (Mogador)	31.51	-9.76	Morocco	ESA003.A	Homo sapiens	300	10.1073/pnas.2021655118	oral	dental calculus	ENA	PRJEB34569	ERS3774471
 FellowsYates2021	2021	10.1073/pnas.2021655118	Essaouira (Mogador)	31.51	-9.76	Morocco	ESA004.A	Homo sapiens	300	10.1073/pnas.2021655118	oral	dental calculus	ENA	PRJEB34569	ERS3774472

diff --git a/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv b/ancientsinglegenome-hostassociated/samples/ancientsinglegenome-hostassociated_samples.tsv
diff --git a/assets/enums/geo_loc_name.json b/assets/enums/geo_loc_name.json
@@ -64,7 +64,7 @@
         "Cuba",
         "Curacao",
         "Cyprus",
-        "Czech Republic",
+        "Czechia",
         "Democratic Republic of the Congo",
         "Denmark",
         "Djibouti",
@@ -161,7 +161,7 @@
         "Mayotte",
         "Mediterranean Sea",
         "Mexico",
-        "Micronesia",
+        "Micronesia, Federated States of",
         "Midway Islands",
         "Moldova",
         "Monaco",
@@ -210,9 +210,11 @@
         "Ross Sea",
         "Russia",
         "Rwanda",
+        "Saint Barthelemy",
         "Saint Helena",
         "Saint Kitts and Nevis",
         "Saint Lucia",
+        "Saint Martin",
         "Saint Pierre and Miquelon",
         "Saint Vincent and the Grenadines",
         "Samoa",

diff --git a/assets/images/figures/AncientMetagenomeDir-Library_Timeline_Libraries.png b/assets/images/figures/AncientMetagenomeDir-Library_Timeline_Libraries.png
diff --git a/assets/images/figures/AncientMetagenomeDir-Library_Timeline_Libraries.svg b/assets/images/figures/AncientMetagenomeDir-Library_Timeline_Libraries.svg
diff --git a/...ges/figures/AncientMetagenomeDir-Library_Timeline_Libraries_InstrumentModel.png b/...ges/figures/AncientMetagenomeDir-Library_Timeline_Libraries_InstrumentModel.png
diff --git a/...ges/figures/AncientMetagenomeDir-Library_Timeline_Libraries_InstrumentModel.svg b/...ges/figures/AncientMetagenomeDir-Library_Timeline_Libraries_InstrumentModel.svg
diff --git a/...mages/figures/AncientMetagenomeDir-Library_Timeline_Libraries_LibraryLayout.png b/...mages/figures/AncientMetagenomeDir-Library_Timeline_Libraries_LibraryLayout.png
diff --git a/...mages/figures/AncientMetagenomeDir-Library_Timeline_Libraries_LibraryLayout.svg b/...mages/figures/AncientMetagenomeDir-Library_Timeline_Libraries_LibraryLayout.svg
diff --git a/...es/figures/AncientMetagenomeDir-Library_Timeline_Libraries_LibraryTreatment.png b/...es/figures/AncientMetagenomeDir-Library_Timeline_Libraries_LibraryTreatment.png
diff --git a/...es/figures/AncientMetagenomeDir-Library_Timeline_Libraries_LibraryTreatment.svg b/...es/figures/AncientMetagenomeDir-Library_Timeline_Libraries_LibraryTreatment.svg
diff --git a/...s/images/figures/AncientMetagenomeDir-Library_Timeline_Libraries_StrandType.png b/...s/images/figures/AncientMetagenomeDir-Library_Timeline_Libraries_StrandType.png
diff --git a/...s/images/figures/AncientMetagenomeDir-Library_Timeline_Libraries_StrandType.svg b/...s/images/figures/AncientMetagenomeDir-Library_Timeline_Libraries_StrandType.svg
diff --git a/assets/images/figures/AncientMetagenomeDir-Library_Timeline_Reads.png b/assets/images/figures/AncientMetagenomeDir-Library_Timeline_Reads.png
diff --git a/assets/images/figures/AncientMetagenomeDir-Library_Timeline_Reads.svg b/assets/images/figures/AncientMetagenomeDir-Library_Timeline_Reads.svg
diff --git a/assets/images/figures/AncientMetagenomeDir-Publication_Timeline.svg b/assets/images/figures/AncientMetagenomeDir-Publication_Timeline.svg